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Protein Ontology Report - mKDM1B

PR:Q8CIG3 - http://purl.obolibrary.org/obo/PR_Q8CIG3
This page represents a class of proteins encompassing all the protein products of the Kdm1b gene in Mus musculus.
Ontology Information
PRO ID PR:Q8CIG3 Show OBO stanza / PAF / GPI
PRO name lysine-specific histone demethylase 1B (mouse)
Synonyms
PRO-short-label: EXACT: mKDM1B
Gene-based: RELATED: Aof1 | Kdm1b | Lsd2
Other: EXACT: flavin-containing amine oxidase domain-containing protein 1 (mouse) | lysine-specific histone demethylase 2 (mouse)
Definition A lysine-specific histone demethylase 2 that is encoded in the genome of mouse. [OMA:Q8CIG3, PRO:DNx]
PRO Category organism-gene
Parent PR:000003320 lysine-specific histone demethylase 2
Gene Template MGI:2145261 Kdm1b
Taxon NCBITaxon:10090 Mus musculus
Terms by PRO Category Retrieve All terms OBO Stanza / PAF
Organism-Specific
Category Number of Terms
organism-gene 1
organism-sequence 3
organism-modification 0
Term Hierarchy Visualization DAG     OLS     Cytoscape


Interactive Sequence View Select/align proteoforms across species

Protein Forms
PRO ID & Category Annotation Complex Name Short Label Definition & Comment

Functional Annotation
PRO Term GO Annotation Evidence
PR:Q8CIG3
mKDM1B
acts_upstream_of_or_within GO:0006349 regulation of gene expression by genomic imprinting PMID:19727073
acts_upstream_of_or_within GO:0043046 DNA methylation involved in gamete generation PMID:19727073
PR:Q8CIG3-1
mKDM1B/iso:1
acts_upstream_of_or_within GO:0034720 histone H3-K4 demethylation PMID:19727073
enables GO:0034647 histone H3K4me/H3K4me2/H3K4me3 demethylase activity PMID:19407342
enables GO:0034647 histone H3K4me/H3K4me2/H3K4me3 demethylase activity PMID:19727073
enables GO:0008270 zinc ion binding PMID:19407342
enables GO:0050660 flavin adenine dinucleotide binding PMID:19407342
enables GO:0034720 histone H3-K4 demethylation PMID:19407342
located_in GO:0005634 nucleus PMID:19727073
Cellular Location GO Term Protein Forms & Complexes Evidence
GO:0005634 nucleus PR:Q8CIG3-1 mKDM1B/iso:1

PMID:19727073

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