[Term] id: PR:000002204 name: lymphotoxin-alpha def: "A lymphotoxin that is a translation product of the human LTA gene or a 1:1 ortholog thereof." [PRO:WCB] comment: Category=gene. synonym: "LTA" EXACT PRO-short-label [PRO:DNx] synonym: "TNFB" RELATED Gene-based [] synonym: "TNFSF1" RELATED Gene-based [] synonym: "LT-alpha" EXACT [] synonym: "TNF-beta" EXACT [] synonym: "tumor necrosis factor B" EXACT [PRO:DAN] synonym: "tumor necrosis factor ligand superfamily member 1" EXACT [] xref: PIRSF:PIRSF500469 is_a: PR:000050043 ! lymphotoxin [Term] id: PR:000051770 name: lymphotoxin-alpha N-glycosylated 3 (human) def: "A lymphotoxin-alpha (human) that has been N-glycosylated at the residue equivalent to Asn-96 of the amino acid sequence represented by UniProtKB:P01374-1, in which the glycan structure is represented by GlyTouCan:G52038JM. Example: UniProtKB:P01374-1, Asn-96, MOD:00160~GNO:G52038JM." [GlyGen:P01374-1, PMID:8323280, PRO:DNx] comment: Category=organism-modification. Requested by=GlyGen. synonym: "hLTA/NGlyco:3" EXACT PRO-short-label [PRO:DNx] synonym: "UniProtKB:P01374-1, Asn-96, MOD:00160~GNO:G52038JM" NARROW PRO-proteoform-std [PRO:DNx] synonym: "UniProtKB:P01374-1, Asn-96, MOD:00160~UniCarbKB:1881" NARROW [PRO:DNx] is_a: PR:P01374 ! lymphotoxin-alpha (human) relationship: has_part GNO:G52038JM ! G52038JM relationship: has_part MOD:00160 ! N4-glycosyl-L-asparagine relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: PR:000051772 name: lymphotoxin-alpha N-glycosylated 5 (human) def: "A lymphotoxin-alpha (human) that has been N-glycosylated at the residue equivalent to Asn-96 of the amino acid sequence represented by UniProtKB:P01374-1, in which the glycan structure is represented by GlyTouCan:G78059CC. Example: UniProtKB:P01374-1, Asn-96, MOD:00160~GNO:G78059CC." [GlyGen:P01374-1, PMID:8323280, PRO:DNx] comment: Category=organism-modification. Requested by=GlyGen. synonym: "hLTA/NGlyco:5" EXACT PRO-short-label [PRO:DNx] synonym: "UniProtKB:P01374-1, Asn-96, MOD:00160~GNO:G78059CC" NARROW PRO-proteoform-std [PRO:DNx] synonym: "UniProtKB:P01374-1, Asn-96, MOD:00160~UniCarbKB:1603" NARROW [PRO:DNx] is_a: PR:P01374 ! lymphotoxin-alpha (human) relationship: has_part GNO:G78059CC ! G78059CC relationship: has_part MOD:00160 ! N4-glycosyl-L-asparagine relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: PR:000051773 name: lymphotoxin-alpha N-glycosylated 6 (human) def: "A lymphotoxin-alpha (human) that has been N-glycosylated at the residue equivalent to Asn-96 of the amino acid sequence represented by UniProtKB:P01374-1, in which the glycan structure is represented by GlyTouCan:G86357DX. Example: UniProtKB:P01374-1, Asn-96, MOD:00160~GNO:G86357DX." [GlyGen:P01374-1, PMID:8323280, PRO:DNx] comment: Category=organism-modification. Requested by=GlyGen. synonym: "hLTA/NGlyco:6" EXACT PRO-short-label [PRO:DNx] synonym: "UniProtKB:P01374-1, Asn-96, MOD:00160~GNO:G86357DX" NARROW PRO-proteoform-std [PRO:DNx] synonym: "UniProtKB:P01374-1, Asn-96, MOD:00160~UniCarbKB:1663" NARROW [PRO:DNx] is_a: PR:P01374 ! lymphotoxin-alpha (human) relationship: has_part GNO:G86357DX ! G86357DX relationship: has_part MOD:00160 ! N4-glycosyl-L-asparagine relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: PR:000002331 name: lymphotoxin-alpha isoform 1 def: "A lymphotoxin-alpha that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P09225-1 or a 1:1 ortholog thereof." [PRO:JAN] comment: Category=sequence. synonym: "LTA/iso:1" EXACT PRO-short-label [PRO:DNx] is_a: PR:000002204 ! lymphotoxin-alpha [Term] id: PR:000051771 name: lymphotoxin-alpha N-glycosylated 4 (human) def: "A lymphotoxin-alpha (human) that has been N-glycosylated at the residue equivalent to Asn-96 of the amino acid sequence represented by UniProtKB:P01374-1, in which the glycan structure is represented by GlyTouCan:G63889NK. Example: UniProtKB:P01374-1, Asn-96, MOD:00160~GNO:G63889NK." [GlyGen:P01374-1, PMID:8323280, PRO:DNx] comment: Category=organism-modification. Requested by=GlyGen. synonym: "hLTA/NGlyco:4" EXACT PRO-short-label [PRO:DNx] synonym: "UniProtKB:P01374-1, Asn-96, MOD:00160~GNO:G63889NK" NARROW PRO-proteoform-std [PRO:DNx] synonym: "UniProtKB:P01374-1, Asn-96, MOD:00160~UniCarbKB:1669" NARROW [PRO:DNx] is_a: PR:P01374 ! lymphotoxin-alpha (human) relationship: has_part GNO:G63889NK ! G63889NK relationship: has_part MOD:00160 ! N4-glycosyl-L-asparagine relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: PR:P09225-1 name: lymphotoxin-alpha isoform 1 (mouse) def: "A lymphotoxin-alpha isoform 1 that is encoded in the genome of mouse." [PRO:JAN] comment: Category=organism-sequence. synonym: "mLTA/iso:1" EXACT PRO-short-label [PRO:DNx] xref: UniProtKB:P09225-1 intersection_of: only_in_taxon NCBITaxon:10090 ! Mus musculus intersection_of: PR:000002331 ! lymphotoxin-alpha isoform 1 [Term] id: PR:000051769 name: lymphotoxin-alpha N-glycosylated 2 (human) def: "A lymphotoxin-alpha (human) that has been N-glycosylated at the residue equivalent to Asn-96 of the amino acid sequence represented by UniProtKB:P01374-1, in which the glycan structure is represented by GlyTouCan:G45359RY. Example: UniProtKB:P01374-1, Asn-96, MOD:00160~GNO:G45359RY." [GlyGen:P01374-1, PMID:8323280, PRO:DNx] comment: Category=organism-modification. Requested by=GlyGen. synonym: "hLTA/NGlyco:2" EXACT PRO-short-label [PRO:DNx] synonym: "UniProtKB:P01374-1, Asn-96, MOD:00160~GNO:G45359RY" NARROW PRO-proteoform-std [PRO:DNx] synonym: "UniProtKB:P01374-1, Asn-96, MOD:00160~UniCarbKB:1659" NARROW [PRO:DNx] is_a: PR:P01374 ! lymphotoxin-alpha (human) relationship: has_part GNO:G45359RY ! G45359RY relationship: has_part MOD:00160 ! N4-glycosyl-L-asparagine relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: PR:000051768 name: lymphotoxin-alpha N-glycosylated 1 (human) def: "A lymphotoxin-alpha (human) that has been N-glycosylated at the residue equivalent to Asn-96 of the amino acid sequence represented by UniProtKB:P01374-1, in which the glycan structure is represented by GlyTouCan:G29228MX. Example: UniProtKB:P01374-1, Asn-96, MOD:00160~GNO:G29228MX." [GlyGen:P01374-1, PMID:8323280, PRO:DNx] comment: Category=organism-modification. Requested by=GlyGen. synonym: "hLTA/NGlyco:1" EXACT PRO-short-label [PRO:DNx] synonym: "UniProtKB:P01374-1, Asn-96, MOD:00160~GNO:G29228MX" NARROW PRO-proteoform-std [PRO:DNx] synonym: "UniProtKB:P01374-1, Asn-96, MOD:00160~UniCarbKB:1879" NARROW [PRO:DNx] is_a: PR:P01374 ! lymphotoxin-alpha (human) relationship: has_part GNO:G29228MX ! G29228MX relationship: has_part MOD:00160 ! N4-glycosyl-L-asparagine relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: PR:000048265 name: lymphotoxin-alpha, signal peptide removed form (human) def: "A lymphotoxin-alpha (human) that has had the signal peptide removed. UniProtKB:P01374, 35-205." [PRO:DNx, Reactome:R-HSA-5667153] comment: Category=organism-modification. synonym: "hLTA/SigPep-" EXACT PRO-short-label [PRO:DNx] synonym: "PRO_0000034463" EXACT PRO-proteoform-ftid [PRO:DNx] synonym: "UniProtKB:P01374, 35-205" EXACT PRO-proteoform-std [PRO:DNx] xref: Reactome:R-HSA-5667153 "PR:000048265 located_in GO:0005886" intersection_of: PR:P01374 ! lymphotoxin-alpha (human) intersection_of: lacks_part SO:0000418 ! signal_peptide relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: PR:P01374 name: lymphotoxin-alpha (human) def: "A lymphotoxin-alpha that is encoded in the genome of human." [PRO:WCB, UniProtKB:P01374] comment: Category=organism-gene. synonym: "LTA" RELATED Gene-based [UniProtKB:P01374] synonym: "TNFB" RELATED Gene-based [UniProtKB:P01374] synonym: "hLTA" EXACT PRO-short-label [PRO:DNx] synonym: "TNFSF1" RELATED Gene-based [UniProtKB:P01374] synonym: "LT-alpha (human)" EXACT [UniProtKB:P01374] synonym: "TNF-beta (human)" EXACT [UniProtKB:P01374] synonym: "tumor necrosis factor ligand superfamily member 1 (human)" EXACT [UniProtKB:P01374] xref: UniProtKB:P01374 intersection_of: only_in_taxon NCBITaxon:9606 ! Homo sapiens intersection_of: PR:000002204 ! lymphotoxin-alpha relationship: has_gene_template HGNC:6709 ! LTA (human) [Term] id: PR:000018753 name: lymphotoxin-alpha, signal peptide removed form def: "A lymphotoxin-alpha that has had the signal peptide removed." [PRO:DNx] comment: Category=modification. synonym: "LTA/SigPep-" EXACT PRO-short-label [PRO:DNx] intersection_of: PR:000002204 ! lymphotoxin-alpha intersection_of: lacks_part SO:0000418 ! signal_peptide [Term] id: PR:P01374-1 name: lymphotoxin-alpha isoform 1 (human) def: "A lymphotoxin-alpha isoform 1 that is encoded in the genome of human." [PRO:JAN] comment: Category=organism-sequence. synonym: "hLTA/iso:1" EXACT PRO-short-label [PRO:DNx] xref: UniProtKB:P01374-1 intersection_of: only_in_taxon NCBITaxon:9606 ! Homo sapiens intersection_of: PR:000002331 ! lymphotoxin-alpha isoform 1 [Term] id: PR:000026648 name: lymphotoxin-alpha isoform 1, signal peptide removed form def: "A lymphotoxin-alpha isoform 1 that has had the signal peptide removed." [PRO:DNx] comment: Category=modification. synonym: "LTA/iso:1/SigPep-" EXACT PRO-short-label [PRO:DNx] intersection_of: PR:000002331 ! lymphotoxin-alpha isoform 1 intersection_of: lacks_part SO:0000418 ! signal_peptide [Term] id: PR:P09225 name: lymphotoxin-alpha (mouse) def: "A lymphotoxin-alpha that is encoded in the genome of mouse." [OMA:P09225, PRO:DNx] comment: Category=organism-gene. synonym: "Lta" RELATED Gene-based [UniProtKB:P09225] synonym: "Tnfb" RELATED Gene-based [UniProtKB:P09225] synonym: "mLTA" EXACT PRO-short-label [PRO:DNx] synonym: "Tnfsf1" RELATED Gene-based [UniProtKB:P09225] synonym: "LT-alpha (mouse)" EXACT [UniProtKB:P09225] synonym: "TNF-beta (mouse)" EXACT [UniProtKB:P09225] synonym: "tumor necrosis factor ligand superfamily member 1 (mouse)" EXACT [UniProtKB:P09225] xref: UniProtKB:P09225 intersection_of: only_in_taxon NCBITaxon:10090 ! Mus musculus intersection_of: PR:000002204 ! lymphotoxin-alpha relationship: has_gene_template MGI:104797 ! Lta (mouse) [Term] id: PR:Q06332 name: lymphotoxin-alpha (rat) def: "A lymphotoxin-alpha that is encoded in the genome of rat." [OMA:Q06332, PRO:DNx] comment: Category=organism-gene. synonym: "Lta" RELATED Gene-based [UniProtKB:Q06332] synonym: "Tnfb" RELATED Gene-based [UniProtKB:Q06332] synonym: "rLTA" EXACT PRO-short-label [PRO:DNx] synonym: "Tnfsf1" RELATED Gene-based [UniProtKB:Q06332] synonym: "LT-alpha (rat)" EXACT [UniProtKB:Q06332] synonym: "TNF-beta (rat)" EXACT [UniProtKB:Q06332] synonym: "tumor necrosis factor ligand superfamily member 1 (rat)" EXACT [UniProtKB:Q06332] xref: UniProtKB:Q06332 intersection_of: only_in_taxon NCBITaxon:10116 ! Rattus norvegicus intersection_of: PR:000002204 ! lymphotoxin-alpha relationship: has_gene_template RGD:3020 ! Lta (rat)