[Term]
id: PR:Q9JI03
name: collagen alpha-1(V) chain (rat)
def: "A collagen alpha-1(V) chain that is encoded in the genome of rat." [OMA:Q9JI03, PRO:DNx]
comment: Category=organism-gene.
synonym: "Col5a1" RELATED Gene-based [UniProtKB:Q9JI03]
synonym: "rCOL5A1" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:Q9JI03
intersection_of: only_in_taxon NCBITaxon:10116 ! Rattus norvegicus
intersection_of: PR:000003345 ! collagen alpha-1(V) chain
relationship: has_gene_template RGD:70920 ! Col5a1 (rat)

[Term]
id: PR:000046929
name: collagen alpha-1(V) chain 4-hydroxy-proline form (human)
def: "A collagen alpha-1(V) chain (human) that includes at least one 4-hydroxy-proline. UniProtKB:P20908, MOD:00039." [PRO:DNx, Reactome:R-HSA-2268810]
comment: Category=organism-modification.
synonym: "hCOL5A1/4HyPro+" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P20908, MOD:00039" EXACT PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-2268810 "PR:000046929 located_in GO:0005576"
intersection_of: has_part MOD:00039 ! 4-hydroxy-L-proline
intersection_of: PR:P20908 ! collagen alpha-1(V) chain (human)
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:O88207
name: collagen alpha-1(V) chain (mouse)
def: "A collagen alpha-1(V) chain that is encoded in the genome of mouse." [OMA:O88207, PRO:DNx]
comment: Category=organism-gene.
synonym: "Col5a1" RELATED Gene-based [UniProtKB:O88207]
synonym: "mCOL5A1" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:O88207
intersection_of: only_in_taxon NCBITaxon:10090 ! Mus musculus
intersection_of: PR:000003345 ! collagen alpha-1(V) chain
relationship: has_gene_template MGI:88457 ! Col5a1 (mouse)

[Term]
id: PR:P20908
name: collagen alpha-1(V) chain (human)
def: "A collagen alpha-1(V) chain that is encoded in the genome of human." [PRO:CNA, UniProtKB:P20908]
comment: Category=organism-gene.
synonym: "COL5A1" RELATED Gene-based [UniProtKB:P20908]
synonym: "hCOL5A1" EXACT PRO-short-label [PRO:DNx]
xref: Reactome:R-HSA-2268801 "PR:P20908 located_in GO:0005576"
xref: UniProtKB:P20908
intersection_of: only_in_taxon NCBITaxon:9606 ! Homo sapiens
intersection_of: PR:000003345 ! collagen alpha-1(V) chain
relationship: has_gene_template HGNC:2209 ! COL5A1 (human)

[Term]
id: PR:000003346
name: collagen alpha-1(V) chain isoform 1
def: "A collagen alpha-1(V) chain that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P20908-1 or a 1:1 ortholog thereof." [PRO:CNA]
comment: Category=sequence.
synonym: "COL5A1/iso:1" EXACT PRO-short-label [PRO:DNx]
is_a: PR:000003345 ! collagen alpha-1(V) chain

[Term]
id: PR:000003345
name: collagen alpha-1(V) chain
def: "A collagen type V alpha chain that is a translation product of the human COL5A1 gene or a 1:1 ortholog thereof." [PRO:CNA]
comment: Category=gene.
synonym: "COL5A1" EXACT PRO-short-label [PRO:DNx]
is_a: PR:000003387 ! collagen type V alpha chain

[Term]
id: PR:000003348
name: collagen alpha-1(V) chain isoform 1 cleaved 1
def: "A collagen alpha-1(V) chain isoform 1, signal peptide removed form that has been processed by subsequent removal of the C-terminal propeptide to yield the mature protein. Example: UniProtKB:P20908-1, 38-1605." [PRO:CNA]
comment: Category=modification.
synonym: "COL5A1/iso:1/Clv:1" EXACT PRO-short-label [PRO:DNx]
synonym: "collagen alpha-1(V) chain mature" EXACT []
intersection_of: PR:000021923 ! collagen alpha-1(V) chain isoform 1, signal peptide removed form
intersection_of: lacks_part SO:0001062 ! propeptide

[Term]
id: PR:000021923
name: collagen alpha-1(V) chain isoform 1, signal peptide removed form
def: "A collagen alpha-1(V) chain isoform 1 that has had the signal peptide removed." [PRO:DNx]
comment: Category=modification.
synonym: "COL5A1/iso:1/SigPep-" EXACT PRO-short-label [PRO:DNx]
intersection_of: PR:000003346 ! collagen alpha-1(V) chain isoform 1
intersection_of: lacks_part SO:0000418 ! signal_peptide

[Term]
id: PR:P20908-2
name: collagen alpha-1(V) chain isoform h2 (human)
def: "A collagen alpha-1(V) chain (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P20908-2." [PRO:DNx, UniProtKB:P20908]
comment: Category=organism-sequence.
synonym: "hCOL5A1/iso:h2" EXACT PRO-short-label [PRO:DNx]
synonym: "collagen alpha-1(V) chain isoform B (human)" EXACT [UniProtKB:P20908]
xref: UniProtKB:P20908-2
is_a: PR:P20908 ! collagen alpha-1(V) chain (human)
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:P20908-1
name: collagen alpha-1(V) chain isoform 1 (human)
def: "A collagen alpha-1(V) chain isoform 1 that is encoded in the genome of human." [PRO:CNA]
comment: Category=organism-sequence.
synonym: "hCOL5A1/iso:1" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:P20908-1
intersection_of: only_in_taxon NCBITaxon:9606 ! Homo sapiens
intersection_of: PR:000003346 ! collagen alpha-1(V) chain isoform 1

[Term]
id: PR:O88207-1
name: collagen alpha-1(V) chain isoform m1 (mouse)
def: "A collagen alpha-1(V) chain (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:O88207-1." [PRO:DNx, UniProtKB:O88207]
comment: Category=organism-sequence.
synonym: "mCOL5A1/iso:m1" EXACT PRO-short-label [PRO:DNx]
synonym: "collagen alpha-1(V) chain isoform A (mouse)" EXACT [UniProtKB:O88207]
xref: UniProtKB:O88207-1
is_a: PR:O88207 ! collagen alpha-1(V) chain (mouse)
relationship: only_in_taxon NCBITaxon:10090 ! Mus musculus

[Term]
id: PR:O88207-2
name: collagen alpha-1(V) chain isoform m2 (mouse)
def: "A collagen alpha-1(V) chain (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:O88207-2." [PRO:DNx, UniProtKB:O88207]
comment: Category=organism-sequence.
synonym: "mCOL5A1/iso:m2" EXACT PRO-short-label [PRO:DNx]
synonym: "collagen alpha-1(V) chain isoform B (mouse)" EXACT [UniProtKB:O88207]
xref: UniProtKB:O88207-2
is_a: PR:O88207 ! collagen alpha-1(V) chain (mouse)
relationship: only_in_taxon NCBITaxon:10090 ! Mus musculus

[Term]
id: PR:000018813
name: collagen alpha-1(V) chain proteolytic cleavage product
def: "A collagen alpha-1(V) chain that has been processed by proteolytic cleavage." [PRO:DNx]
comment: Category=modification.
synonym: "COL5A1/ClvPrd" EXACT PRO-short-label [PRO:DNx]
intersection_of: output_of GO:0016485 ! protein processing
intersection_of: PR:000003345 ! collagen alpha-1(V) chain

[Term]
id: PR:000046928
name: collagen alpha-1(V) chain 3-hydroxy-proline and 4-hydroxy-proline form (human)
def: "A collagen alpha-1(V) chain (human) that includes at least one 3-hydroxy-proline and at least one 4-hydroxy-proline. UniProtKB:P20908, MOD:00038|MOD:00039." [PRO:DNx, Reactome:R-HSA-2268730]
comment: Category=organism-modification.
synonym: "hCOL5A1/3hP4hP+" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P20908, MOD:00038|MOD:00039" EXACT PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-2268730 "PR:000046928 located_in GO:0005576"
intersection_of: has_part MOD:00038 ! 3-hydroxy-L-proline
intersection_of: has_part MOD:00039 ! 4-hydroxy-L-proline
intersection_of: PR:P20908 ! collagen alpha-1(V) chain (human)
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000046938
name: collagen alpha-1(V) chain, signal peptide removed 5-hydroxy-lysine and 4-hydroxy-proline form (human)
def: "A collagen alpha-1(V) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine and at least one 4-hydroxy-proline. UniProtKB:P20908, 38-1838, MOD:00037|MOD:00039." [PRO:DNx, Reactome:R-HSA-2022948, Reactome:R-HSA-2268718]
comment: Category=organism-modification.
synonym: "hCOL5A1/SigPep-/5hL4hP+" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P20908, 38-1838, MOD:00037|MOD:00039" EXACT PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-2022948 "PR:000046938 located_in GO:0005788"
xref: Reactome:R-HSA-2268718 "PR:000046938 located_in GO:0005576"
intersection_of: has_part MOD:00037 ! 5-hydroxy-L-lysine
intersection_of: has_part MOD:00039 ! 4-hydroxy-L-proline
intersection_of: PR:P20908 ! collagen alpha-1(V) chain (human)
intersection_of: lacks_part SO:0000418 ! signal_peptide
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000046932
name: collagen alpha-1(V) chain 5-hydroxy-lysine and 4-hydroxy-proline form (human)
def: "A collagen alpha-1(V) chain (human) that includes at least one 5-hydroxy-lysine and at least one 4-hydroxy-proline. UniProtKB:P20908, MOD:00037|MOD:00039." [PRO:DNx, Reactome:R-HSA-2268827]
comment: Category=organism-modification.
synonym: "hCOL5A1/5hL4hP+" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P20908, MOD:00037|MOD:00039" EXACT PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-2268827 "PR:000046932 located_in GO:0005576"
intersection_of: has_part MOD:00037 ! 5-hydroxy-L-lysine
intersection_of: has_part MOD:00039 ! 4-hydroxy-L-proline
intersection_of: PR:P20908 ! collagen alpha-1(V) chain (human)
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000046933
name: collagen alpha-1(V) chain, signal peptide removed form (human)
def: "A collagen alpha-1(V) chain (human) that has had the signal peptide removed. UniProtKB:P20908, 38-1838." [PRO:DNx, Reactome:R-HSA-2022460, Reactome:R-HSA-2268703]
comment: Category=organism-modification.
synonym: "hCOL5A1/SigPep-" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P20908, 38-1838" EXACT PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-2022460 "PR:000046933 located_in GO:0005788"
xref: Reactome:R-HSA-2268703 "PR:000046933 located_in GO:0005576"
intersection_of: PR:P20908 ! collagen alpha-1(V) chain (human)
intersection_of: lacks_part SO:0000418 ! signal_peptide
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000046930
name: collagen alpha-1(V) chain 5-hydroxy-lysine form (human)
def: "A collagen alpha-1(V) chain (human) that includes at least one 5-hydroxy-lysine. UniProtKB:P20908, MOD:00037." [PRO:DNx, Reactome:R-HSA-2268902]
comment: Category=organism-modification.
synonym: "hCOL5A1/5HyLys+" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P20908, MOD:00037" EXACT PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-2268902 "PR:000046930 located_in GO:0005576"
intersection_of: has_part MOD:00037 ! 5-hydroxy-L-lysine
intersection_of: PR:P20908 ! collagen alpha-1(V) chain (human)
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000046931
name: collagen alpha-1(V) chain 5-hydroxy-lysine, 3-hydroxy-proline and 4-hydroxy-proline form (human)
def: "A collagen alpha-1(V) chain (human) that includes at least one 5-hydroxy-lysine, at least one 3-hydroxy-proline and at least one 4-hydroxy-proline. UniProtKB:P20908, MOD:00037|MOD:00038|MOD:00039." [PRO:DNx, Reactome:R-HSA-2268789]
comment: Category=organism-modification.
synonym: "hCOL5A1/5hL3hP4hP+" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P20908, MOD:00037|MOD:00038|MOD:00039" EXACT PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-2268789 "PR:000046931 located_in GO:0005576"
intersection_of: has_part MOD:00037 ! 5-hydroxy-L-lysine
intersection_of: has_part MOD:00038 ! 3-hydroxy-L-proline
intersection_of: has_part MOD:00039 ! 4-hydroxy-L-proline
intersection_of: PR:P20908 ! collagen alpha-1(V) chain (human)
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000046936
name: collagen alpha-1(V) chain, signal peptide removed 5-hydroxy-lysine form (human)
def: "A collagen alpha-1(V) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine. UniProtKB:P20908, 38-1838, MOD:00037." [PRO:DNx, Reactome:R-HSA-2022989, Reactome:R-HSA-2268644]
comment: Category=organism-modification.
synonym: "hCOL5A1/SigPep-/5HyLys+" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P20908, 38-1838, MOD:00037" EXACT PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-2022989 "PR:000046936 located_in GO:0005788"
xref: Reactome:R-HSA-2268644 "PR:000046936 located_in GO:0005576"
intersection_of: has_part MOD:00037 ! 5-hydroxy-L-lysine
intersection_of: PR:P20908 ! collagen alpha-1(V) chain (human)
intersection_of: lacks_part SO:0000418 ! signal_peptide
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000046937
name: collagen alpha-1(V) chain, signal peptide removed 5-hydroxy-lysine, 3-hydroxy-proline and 4-hydroxy-proline form (human)
def: "A collagen alpha-1(V) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine, at least one 3-hydroxy-proline and at least one 4-hydroxy-proline. UniProtKB:P20908, 38-1838, MOD:00037|MOD:00038|MOD:00039." [PRO:DNx, Reactome:R-HSA-2022970, Reactome:R-HSA-2268663]
comment: Category=organism-modification.
synonym: "hCOL5A1/SigPep-/5hL3hP4hP+" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P20908, 38-1838, MOD:00037|MOD:00038|MOD:00039" EXACT PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-2022970 "PR:000046937 located_in GO:0005788"
xref: Reactome:R-HSA-2268663 "PR:000046937 located_in GO:0005576"
intersection_of: has_part MOD:00037 ! 5-hydroxy-L-lysine
intersection_of: has_part MOD:00038 ! 3-hydroxy-L-proline
intersection_of: has_part MOD:00039 ! 4-hydroxy-L-proline
intersection_of: PR:P20908 ! collagen alpha-1(V) chain (human)
intersection_of: lacks_part SO:0000418 ! signal_peptide
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000046934
name: collagen alpha-1(V) chain, signal peptide removed 3-hydroxy-proline and 4-hydroxy-proline form (human)
def: "A collagen alpha-1(V) chain (human) that has had the signal peptide removed and that includes at least one 3-hydroxy-proline and at least three 4-hydroxy-prolines. UniProtKB:P20908, 38-1838, MOD:00038|MOD:00039(3+)." [PRO:DNx, Reactome:R-HSA-2022483, Reactome:R-HSA-2268667]
comment: Category=organism-modification.
synonym: "hCOL5A1/SigPep-/3HyPro4HyPro(3+)" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P20908, 38-1838, MOD:00038|MOD:00039(3+)" EXACT PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-2022483 "PR:000046934 located_in GO:0005788"
xref: Reactome:R-HSA-2268667 "PR:000046934 located_in GO:0005576"
intersection_of: has_part MOD:00038 ! 3-hydroxy-L-proline
intersection_of: has_component MOD:00039 ! 4-hydroxy-L-proline
intersection_of: PR:P20908 ! collagen alpha-1(V) chain (human)
intersection_of: lacks_part SO:0000418 ! signal_peptide
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000046935
name: collagen alpha-1(V) chain, signal peptide removed 4-hydroxy-proline form (human)
def: "A collagen alpha-1(V) chain (human) that has had the signal peptide removed and that includes at least one 4-hydroxy-proline. UniProtKB:P20908, 38-1838, MOD:00039." [PRO:DNx, Reactome:R-HSA-2022510, Reactome:R-HSA-2268658]
comment: Category=organism-modification.
synonym: "hCOL5A1/SigPep-/4HyPro+" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P20908, 38-1838, MOD:00039" EXACT PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-2022510 "PR:000046935 located_in GO:0005788"
xref: Reactome:R-HSA-2268658 "PR:000046935 located_in GO:0005576"
intersection_of: has_part MOD:00039 ! 4-hydroxy-L-proline
intersection_of: PR:P20908 ! collagen alpha-1(V) chain (human)
intersection_of: lacks_part SO:0000418 ! signal_peptide
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens