[Term]
id: PR:000003357
name: collagen alpha-2(VI) chain
def: "A collagen type VI alpha chain that is a translation product of the human COL6A2 gene or a 1:1 ortholog thereof." [PRO:CNA]
comment: Category=gene.
synonym: "COL6A2" EXACT PRO-short-label [PRO:DNx]
is_a: PR:000003386 ! collagen type VI alpha chain

[Term]
id: PR:000003358
name: collagen alpha-2(VI) chain isoform 1
def: "A collagen alpha-2(VI) chain that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P12110-1 or a 1:1 ortholog thereof." [PRO:CNA]
comment: Category=sequence.
synonym: "COL6A2/iso:1" EXACT PRO-short-label [PRO:DNx]
synonym: "collagen alpha-2(VI) isoform 2C2" EXACT []
synonym: "collagen alpha-2(VI) chain isoform 2C2" EXACT []
is_a: PR:000003357 ! collagen alpha-2(VI) chain

[Term]
id: PR:P12110
name: collagen alpha-2(VI) chain (human)
def: "A collagen alpha-2(VI) chain that is encoded in the genome of human." [PRO:CNA, UniProtKB:P12110]
comment: Category=organism-gene.
synonym: "COL6A2" RELATED Gene-based [UniProtKB:P12110]
synonym: "hCOL6A2" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:P12110
intersection_of: only_in_taxon NCBITaxon:9606 ! Homo sapiens
intersection_of: PR:000003357 ! collagen alpha-2(VI) chain
relationship: has_gene_template HGNC:2212 ! COL6A2 (human)

[Term]
id: PR:000046969
name: collagen alpha-2(VI) chain, signal peptide removed 4-hydroxy-proline form (human)
def: "A collagen alpha-2(VI) chain (human) that has had the signal peptide removed and that includes at least one 4-hydroxy-proline. UniProtKB:P12110, 21-1019, MOD:00039." [PRO:DNx, Reactome:R-HSA-2022423, Reactome:R-HSA-2127477]
comment: Category=organism-modification.
synonym: "hCOL6A2/SigPep-/4HyPro+" EXACT PRO-short-label [PRO:DNx]
synonym: "PRO_0000005832, MOD:00039" EXACT PRO-proteoform-ftid [PRO:DNx]
synonym: "UniProtKB:P12110, 21-1019, MOD:00039" EXACT PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-2022423 "PR:000046969 located_in GO:0005788"
xref: Reactome:R-HSA-2127477 "PR:000046969 located_in GO:0005576"
intersection_of: has_part MOD:00039 ! 4-hydroxy-L-proline
intersection_of: PR:P12110 ! collagen alpha-2(VI) chain (human)
intersection_of: lacks_part SO:0000418 ! signal_peptide
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000046968
name: collagen alpha-2(VI) chain, signal peptide removed 3-hydroxy-proline and 4-hydroxy-proline form (human)
def: "A collagen alpha-2(VI) chain (human) that has had the signal peptide removed and that includes at least one 3-hydroxy-proline and at least one 4-hydroxy-proline. UniProtKB:P12110, 21-1019, MOD:00038|MOD:00039." [PRO:DNx, Reactome:R-HSA-2022438, Reactome:R-HSA-2127495]
comment: Category=organism-modification.
synonym: "hCOL6A2/SigPep-/3hP4hP+" EXACT PRO-short-label [PRO:DNx]
synonym: "PRO_0000005832, MOD:00038|MOD:00039" EXACT PRO-proteoform-ftid [PRO:DNx]
synonym: "UniProtKB:P12110, 21-1019, MOD:00038|MOD:00039" EXACT PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-2022438 "PR:000046968 located_in GO:0005788"
xref: Reactome:R-HSA-2127495 "PR:000046968 located_in GO:0005576"
intersection_of: has_part MOD:00038 ! 3-hydroxy-L-proline
intersection_of: has_part MOD:00039 ! 4-hydroxy-L-proline
intersection_of: PR:P12110 ! collagen alpha-2(VI) chain (human)
intersection_of: lacks_part SO:0000418 ! signal_peptide
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:P12110-3
name: collagen alpha-2(VI) chain isoform h2C2A' (human)
def: "A collagen alpha-2(VI) chain (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P12110-3." [PRO:DNx, UniProtKB:P12110]
comment: Category=organism-sequence.
synonym: "hCOL6A2/iso:h2C2A'" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:P12110-3
is_a: PR:P12110 ! collagen alpha-2(VI) chain (human)
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:P12110-2
name: collagen alpha-2(VI) chain isoform h2C2A (human)
def: "A collagen alpha-2(VI) chain (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P12110-2." [PRO:DNx, UniProtKB:P12110]
comment: Category=organism-sequence.
synonym: "hCOL6A2/iso:h2C2A" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:P12110-2
is_a: PR:P12110 ! collagen alpha-2(VI) chain (human)
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000046967
name: collagen alpha-2(VI) chain, signal peptide removed form (human)
def: "A collagen alpha-2(VI) chain (human) that has had the signal peptide removed. UniProtKB:P12110, 21-1019." [PRO:DNx, Reactome:R-HSA-1614503, Reactome:R-HSA-2127536]
comment: Category=organism-modification.
synonym: "PRO_0000005832" EXACT PRO-proteoform-ftid [PRO:DNx]
synonym: "hCOL6A2/SigPep-" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P12110, 21-1019" EXACT PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-2127536 "PR:000046967 located_in GO:0005576"
xref: Reactome:R-HSA-1614503 "PR:000046967 located_in GO:0005788"
intersection_of: PR:P12110 ! collagen alpha-2(VI) chain (human)
intersection_of: lacks_part SO:0000418 ! signal_peptide
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000054968
name: collagen alpha-2(VI) chain N-glycosylated 12 (human)
def: "A collagen alpha-2(VI) chain (human) that has been N-glycosylated at the residue equivalent to Asn-785 of the amino acid sequence represented by UniProtKB:P12110-1, in which the glycan composition is represented by GlyTouCan:G58001LT. Example: UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G58001LT." [GlyGen:P12110-1, PMID:29741879, PRO:DNx]
comment: Category=organism-modification. Requested by=GlyGen.
synonym: "hCOL6A2/NGlyco:12" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G58001LT" NARROW PRO-proteoform-std [PRO:DNx]
is_a: PR:P12110 ! collagen alpha-2(VI) chain (human)
relationship: has_part GNO:G58001LT ! G58001LT
relationship: has_part MOD:00160 ! N4-glycosyl-L-asparagine
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000054969
name: collagen alpha-2(VI) chain N-glycosylated 13 (human)
def: "A collagen alpha-2(VI) chain (human) that has been N-glycosylated at the residue equivalent to Asn-785 of the amino acid sequence represented by UniProtKB:P12110-1, in which the glycan composition is represented by GlyTouCan:G59626AS. Example: UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G59626AS." [GlyGen:P12110-1, PMID:29741879, PRO:DNx]
comment: Category=organism-modification. Requested by=GlyGen.
synonym: "hCOL6A2/NGlyco:13" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G59626AS" NARROW PRO-proteoform-std [PRO:DNx]
is_a: PR:P12110 ! collagen alpha-2(VI) chain (human)
relationship: has_part GNO:G59626AS ! G59626AS
relationship: has_part MOD:00160 ! N4-glycosyl-L-asparagine
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:P15988
name: collagen alpha-2(VI) chain (chicken)
def: "A collagen alpha-2(VI) chain that is encoded in the genome of chicken." [OMA:P15988, PANTHER:PTHR24023:SF67, PRO:DNx]
comment: Category=organism-gene.
synonym: "COL6A2" RELATED Gene-based [UniProtKB:P15988]
synonym: "chick-COL6A2" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:P15988
intersection_of: only_in_taxon NCBITaxon:9031 ! Gallus gallus
intersection_of: PR:000003357 ! collagen alpha-2(VI) chain
relationship: has_gene_template NCBIGene:396292 ! COL6A2 (chicken)

[Term]
id: PR:000054962
name: obsolete collagen alpha-2(VI) chain N-glycosylated 5 (human)
is_obsolete: true
replaced_by: PR:000054961

[Term]
id: PR:000054963
name: collagen alpha-2(VI) chain N-glycosylated 7 (human)
def: "A collagen alpha-2(VI) chain (human) that has been N-glycosylated at the residue equivalent to Asn-785 of the amino acid sequence represented by UniProtKB:P12110-1, in which the glycan composition is represented by GlyTouCan:G40664HB. Example: UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G40664HB." [GlyGen:P12110-1, PMID:29741879, PRO:DNx]
comment: Category=organism-modification. Requested by=GlyGen.
synonym: "hCOL6A2/NGlyco:7" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G40664HB" NARROW PRO-proteoform-std [PRO:DNx]
is_a: PR:P12110 ! collagen alpha-2(VI) chain (human)
relationship: has_part GNO:G40664HB ! G40664HB
relationship: has_part MOD:00160 ! N4-glycosyl-L-asparagine
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000054960
name: collagen alpha-2(VI) chain N-glycosylated 4 (human)
def: "A collagen alpha-2(VI) chain (human) that has been N-glycosylated at the residue equivalent to Asn-785 of the amino acid sequence represented by UniProtKB:P12110-1, in which the glycan composition is represented by GlyTouCan:G16175ZV. Example: UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G16175ZV." [GlyGen:P12110-1, PMID:29741879, PRO:DNx]
comment: Category=organism-modification. Requested by=GlyGen.
synonym: "hCOL6A2/NGlyco:4" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G16175ZV" NARROW PRO-proteoform-std [PRO:DNx]
is_a: PR:P12110 ! collagen alpha-2(VI) chain (human)
relationship: has_part GNO:G16175ZV ! G16175ZV
relationship: has_part MOD:00160 ! N4-glycosyl-L-asparagine
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000054961
name: collagen alpha-2(VI) chain N-glycosylated 5 (human)
def: "A collagen alpha-2(VI) chain (human) that has been N-glycosylated at the residue equivalent to Asn-785 of the amino acid sequence represented by UniProtKB:P12110-1, in which the glycan composition is represented by GlyTouCan:G27126ED. Example: UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G27126ED." [GlyGen:P12110-1, PMID:29741879, PRO:DNx]
comment: Category=organism-modification. Requested by=GlyGen.
synonym: "hCOL6A2/NGlyco:5" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G27126ED" NARROW PRO-proteoform-std [PRO:DNx]
is_a: PR:P12110 ! collagen alpha-2(VI) chain (human)
relationship: has_part GNO:G27126ED ! G27126ED
relationship: has_part MOD:00160 ! N4-glycosyl-L-asparagine
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000054966
name: collagen alpha-2(VI) chain N-glycosylated 10 (human)
def: "A collagen alpha-2(VI) chain (human) that has been N-glycosylated at the residue equivalent to Asn-785 of the amino acid sequence represented by UniProtKB:P12110-1, in which the glycan composition is represented by GlyTouCan:G50073PQ. Example: UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G50073PQ." [GlyGen:P12110-1, PMID:29741879, PRO:DNx]
comment: Category=organism-modification. Requested by=GlyGen.
synonym: "hCOL6A2/NGlyco:10" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G50073PQ" NARROW PRO-proteoform-std [PRO:DNx]
is_a: PR:P12110 ! collagen alpha-2(VI) chain (human)
relationship: has_part GNO:G50073PQ ! G50073PQ
relationship: has_part MOD:00160 ! N4-glycosyl-L-asparagine
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000054967
name: collagen alpha-2(VI) chain N-glycosylated 11 (human)
def: "A collagen alpha-2(VI) chain (human) that has been N-glycosylated at the residue equivalent to Asn-785 of the amino acid sequence represented by UniProtKB:P12110-1, in which the glycan composition is represented by GlyTouCan:G54600FO. Example: UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G54600FO." [GlyGen:P12110-1, PMID:29741879, PRO:DNx]
comment: Category=organism-modification. Requested by=GlyGen.
synonym: "hCOL6A2/NGlyco:11" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G54600FO" NARROW PRO-proteoform-std [PRO:DNx]
is_a: PR:P12110 ! collagen alpha-2(VI) chain (human)
relationship: has_part GNO:G54600FO ! G54600FO
relationship: has_part MOD:00160 ! N4-glycosyl-L-asparagine
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000054964
name: collagen alpha-2(VI) chain N-glycosylated 8 (human)
def: "A collagen alpha-2(VI) chain (human) that has been N-glycosylated at the residue equivalent to Asn-785 of the amino acid sequence represented by UniProtKB:P12110-1, in which the glycan composition is represented by GlyTouCan:G46503DX. Example: UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G46503DX." [GlyGen:P12110-1, PMID:29741879, PRO:DNx]
comment: Category=organism-modification. Requested by=GlyGen.
synonym: "hCOL6A2/NGlyco:8" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G46503DX" NARROW PRO-proteoform-std [PRO:DNx]
is_a: PR:P12110 ! collagen alpha-2(VI) chain (human)
relationship: has_part GNO:G46503DX ! G46503DX
relationship: has_part MOD:00160 ! N4-glycosyl-L-asparagine
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000054965
name: collagen alpha-2(VI) chain N-glycosylated 9 (human)
def: "A collagen alpha-2(VI) chain (human) that has been N-glycosylated at the residue equivalent to Asn-785 of the amino acid sequence represented by UniProtKB:P12110-1, in which the glycan composition is represented by GlyTouCan:G47737VJ. Example: UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G47737VJ." [GlyGen:P12110-1, PMID:29741879, PRO:DNx]
comment: Category=organism-modification. Requested by=GlyGen.
synonym: "hCOL6A2/NGlyco:9" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G47737VJ" NARROW PRO-proteoform-std [PRO:DNx]
is_a: PR:P12110 ! collagen alpha-2(VI) chain (human)
relationship: has_part GNO:G47737VJ ! G47737VJ
relationship: has_part MOD:00160 ! N4-glycosyl-L-asparagine
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:P12110-1
name: collagen alpha-2(VI) chain isoform 2C2 (human)
def: "A collagen alpha-2(VI) chain isoform 1 that is encoded in the genome of human." [PRO:CNA]
comment: Category=organism-sequence.
synonym: "hCOL6A2/iso:2C2" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:P12110-1
intersection_of: only_in_taxon NCBITaxon:9606 ! Homo sapiens
intersection_of: PR:000003358 ! collagen alpha-2(VI) chain isoform 1

[Term]
id: PR:000054973
name: collagen alpha-2(VI) chain O-glycosylated 1 (human)
def: "A collagen alpha-2(VI) chain (human) that has been O-glycosylated at the residue equivalent to Thr-218 of the amino acid sequence represented by UniProtKB:P12110-1, in which the glycan composition is represented by GlyTouCan:G43417UB. Example: UniProtKB:P12110-1, Thr-218, MOD:00005~GNO:G43417UB." [GlyGen:P12110-1, PMID:30459171, PRO:DNx]
comment: Category=organism-modification. Requested by=GlyGen.
synonym: "hCOL6A2/OGlyco:1" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P12110-1, Thr-218, MOD:00005~GNO:G43417UB" NARROW PRO-proteoform-std [PRO:DNx]
is_a: PR:P12110 ! collagen alpha-2(VI) chain (human)
relationship: has_part GNO:G43417UB ! G43417UB
relationship: has_part MOD:00005 ! O-glycosyl-L-threonine
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000003360
name: collagen alpha-2(VI) chain isoform 1, signal peptide removed form
def: "A collagen alpha-2(VI) chain isoform 1 that has had the signal peptide removed to yield the mature protein. Example: UniProtKB:P12110-1, 21-1019." [PRO:CNA]
comment: Category=modification.
synonym: "COL6A2/iso:1/SigPep-" EXACT PRO-short-label [PRO:DNx]
synonym: "collagen alpha-2(VI) chain mature" EXACT []
synonym: "collagen alpha-2(VI) chain isoform 1 cleaved 1" EXACT []
intersection_of: PR:000003358 ! collagen alpha-2(VI) chain isoform 1
intersection_of: lacks_part SO:0000418 ! signal_peptide

[Term]
id: PR:000054972
name: collagen alpha-2(VI) chain N-glycosylated 16 (human)
def: "A collagen alpha-2(VI) chain (human) that has been N-glycosylated at the residue equivalent to Asn-785 of the amino acid sequence represented by UniProtKB:P12110-1, in which the glycan composition is represented by GlyTouCan:G87051GH. Example: UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G87051GH." [GlyGen:P12110-1, PMID:29741879, PRO:DNx]
comment: Category=organism-modification. Requested by=GlyGen.
synonym: "hCOL6A2/NGlyco:16" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G87051GH" NARROW PRO-proteoform-std [PRO:DNx]
is_a: PR:P12110 ! collagen alpha-2(VI) chain (human)
relationship: has_part GNO:G87051GH ! G87051GH
relationship: has_part MOD:00160 ! N4-glycosyl-L-asparagine
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000025422
name: collagen alpha-2(VI) chain proteolytic cleavage product
def: "A collagen alpha-2(VI) chain that has been processed by proteolytic cleavage." [PRO:DNx]
comment: Category=modification.
synonym: "COL6A2/ClvPrd" EXACT PRO-short-label [PRO:DNx]
intersection_of: output_of GO:0016485 ! protein processing
intersection_of: PR:000003357 ! collagen alpha-2(VI) chain

[Term]
id: PR:Q02788
name: collagen alpha-2(VI) chain (mouse)
def: "A collagen alpha-2(VI) chain that is encoded in the genome of mouse." [OMA:Q02788, PRO:DNx]
comment: Category=organism-gene.
synonym: "Col6a2" RELATED Gene-based [UniProtKB:Q02788]
synonym: "mCOL6A2" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:Q02788
intersection_of: only_in_taxon NCBITaxon:10090 ! Mus musculus
intersection_of: PR:000003357 ! collagen alpha-2(VI) chain
relationship: has_gene_template MGI:88460 ! Col6a2 (mouse)

[Term]
id: PR:P15988-2
name: collagen alpha-2(VI) chain isoform 2 (chicken)
def: "A collagen alpha-2(VI) chain (chicken) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P15988-2." [PRO:DNx, UniProtKB:P15988]
comment: Category=organism-sequence.
synonym: "chick-COL6A2/iso:2" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:P15988-2
is_a: PR:P15988 ! collagen alpha-2(VI) chain (chicken)
relationship: only_in_taxon NCBITaxon:9031 ! Gallus gallus

[Term]
id: PR:P15988-1
name: collagen alpha-2(VI) chain isoform 1 (chicken)
def: "A collagen alpha-2(VI) chain (chicken) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P15988-1." [PRO:DNx, UniProtKB:P15988]
comment: Category=organism-sequence.
synonym: "chick-COL6A2/iso:1" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:P15988-1
is_a: PR:P15988 ! collagen alpha-2(VI) chain (chicken)
relationship: only_in_taxon NCBITaxon:9031 ! Gallus gallus

[Term]
id: PR:000046972
name: collagen alpha-2(VI) chain, signal peptide removed 5-hydroxy-lysine and 4-hydroxy-proline form (human)
def: "A collagen alpha-2(VI) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine and at least one 4-hydroxy-proline. UniProtKB:P12110, 21-1019, MOD:00037|MOD:00039." [PRO:DNx, Reactome:R-HSA-2022975, Reactome:R-HSA-2127475]
comment: Category=organism-modification.
synonym: "hCOL6A2/SigPep-/5hL4hP+" EXACT PRO-short-label [PRO:DNx]
synonym: "PRO_0000005832, MOD:00037|MOD:00039" EXACT PRO-proteoform-ftid [PRO:DNx]
synonym: "UniProtKB:P12110, 21-1019, MOD:00037|MOD:00039" EXACT PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-2022975 "PR:000046972 located_in GO:0005788"
xref: Reactome:R-HSA-2127475 "PR:000046972 located_in GO:0005576"
intersection_of: has_part MOD:00037 ! 5-hydroxy-L-lysine
intersection_of: has_part MOD:00039 ! 4-hydroxy-L-proline
intersection_of: PR:P12110 ! collagen alpha-2(VI) chain (human)
intersection_of: lacks_part SO:0000418 ! signal_peptide
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000046970
name: collagen alpha-2(VI) chain, signal peptide removed 5-hydroxy-lysine form (human)
def: "A collagen alpha-2(VI) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine. UniProtKB:P12110, 21-1019, MOD:00037." [PRO:DNx, Reactome:R-HSA-2023007, Reactome:R-HSA-2127467]
comment: Category=organism-modification.
synonym: "hCOL6A2/SigPep-/5HyLys+" EXACT PRO-short-label [PRO:DNx]
synonym: "PRO_0000005832, MOD:00037" EXACT PRO-proteoform-ftid [PRO:DNx]
synonym: "UniProtKB:P12110, 21-1019, MOD:00037" EXACT PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-2023007 "PR:000046970 located_in GO:0005788"
xref: Reactome:R-HSA-2127467 "PR:000046970 located_in GO:0005576"
intersection_of: has_part MOD:00037 ! 5-hydroxy-L-lysine
intersection_of: PR:P12110 ! collagen alpha-2(VI) chain (human)
intersection_of: lacks_part SO:0000418 ! signal_peptide
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000046971
name: collagen alpha-2(VI) chain, signal peptide removed 5-hydroxy-lysine, 3-hydroxy-proline and 4-hydroxy-proline form (human)
def: "A collagen alpha-2(VI) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine, at least one 3-hydroxy-proline and at least one 4-hydroxy-proline. UniProtKB:P12110, 21-1019, MOD:00037|MOD:00038|MOD:00039." [PRO:DNx, Reactome:R-HSA-2022943, Reactome:R-HSA-2127498]
comment: Category=organism-modification.
synonym: "hCOL6A2/SigPep-/5hL3hP4hP+" EXACT PRO-short-label [PRO:DNx]
synonym: "PRO_0000005832, MOD:00037|MOD:00038|MOD:00039" EXACT PRO-proteoform-ftid [PRO:DNx]
synonym: "UniProtKB:P12110, 21-1019, MOD:00037|MOD:00038|MOD:00039" EXACT PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-2022943 "PR:000046971 located_in GO:0005788"
xref: Reactome:R-HSA-2127498 "PR:000046971 located_in GO:0005576"
intersection_of: has_part MOD:00037 ! 5-hydroxy-L-lysine
intersection_of: has_part MOD:00038 ! 3-hydroxy-L-proline
intersection_of: has_part MOD:00039 ! 4-hydroxy-L-proline
intersection_of: PR:P12110 ! collagen alpha-2(VI) chain (human)
intersection_of: lacks_part SO:0000418 ! signal_peptide
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000054974
name: collagen alpha-2(VI) chain O-glycosylated 2 (human)
def: "A collagen alpha-2(VI) chain (human) that has been O-glycosylated at the residue equivalent to Thr-58 of the amino acid sequence represented by UniProtKB:P12110-1, in which the glycan composition is represented by GlyTouCan:G43417UB. Example: UniProtKB:P12110-1, Thr-58, MOD:00005~GNO:G43417UB." [GlyGen:P12110-1, PMID:30459171, PRO:DNx]
comment: Category=organism-modification. Requested by=GlyGen.
synonym: "hCOL6A2/OGlyco:2" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P12110-1, Thr-58, MOD:00005~GNO:G43417UB" NARROW PRO-proteoform-std [PRO:DNx]
is_a: PR:P12110 ! collagen alpha-2(VI) chain (human)
relationship: has_part GNO:G43417UB ! G43417UB
relationship: has_part MOD:00005 ! O-glycosyl-L-threonine
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000054971
name: collagen alpha-2(VI) chain N-glycosylated 15 (human)
def: "A collagen alpha-2(VI) chain (human) that has been N-glycosylated at the residue equivalent to Asn-785 of the amino acid sequence represented by UniProtKB:P12110-1, in which the glycan composition is represented by GlyTouCan:G83633GK. Example: UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G83633GK." [GlyGen:P12110-1, PMID:29741879, PRO:DNx]
comment: Category=organism-modification. Requested by=GlyGen.
synonym: "hCOL6A2/NGlyco:15" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G83633GK" NARROW PRO-proteoform-std [PRO:DNx]
is_a: PR:P12110 ! collagen alpha-2(VI) chain (human)
relationship: has_part GNO:G83633GK ! G83633GK
relationship: has_part MOD:00160 ! N4-glycosyl-L-asparagine
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000054970
name: collagen alpha-2(VI) chain N-glycosylated 14 (human)
def: "A collagen alpha-2(VI) chain (human) that has been N-glycosylated at the residue equivalent to Asn-785 of the amino acid sequence represented by UniProtKB:P12110-1, in which the glycan composition is represented by GlyTouCan:G60923RB. Example: UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G60923RB." [GlyGen:P12110-1, PMID:29741879, PRO:DNx]
comment: Category=organism-modification. Requested by=GlyGen.
synonym: "hCOL6A2/NGlyco:14" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G60923RB" NARROW PRO-proteoform-std [PRO:DNx]
is_a: PR:P12110 ! collagen alpha-2(VI) chain (human)
relationship: has_part GNO:G60923RB ! G60923RB
relationship: has_part MOD:00160 ! N4-glycosyl-L-asparagine
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000054959
name: collagen alpha-2(VI) chain N-glycosylated 3 (human)
def: "A collagen alpha-2(VI) chain (human) that has been N-glycosylated at the residue equivalent to Asn-785 of the amino acid sequence represented by UniProtKB:P12110-1, in which the glycan composition is represented by GlyTouCan:G09197ZW. Example: UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G09197ZW." [GlyGen:P12110-1, PMID:29741879, PRO:DNx]
comment: Category=organism-modification. Requested by=GlyGen.
synonym: "hCOL6A2/NGlyco:3" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G09197ZW" NARROW PRO-proteoform-std [PRO:DNx]
is_a: PR:P12110 ! collagen alpha-2(VI) chain (human)
relationship: has_part GNO:G09197ZW ! G09197ZW
relationship: has_part MOD:00160 ! N4-glycosyl-L-asparagine
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000054958
name: collagen alpha-2(VI) chain N-glycosylated 2 (human)
def: "A collagen alpha-2(VI) chain (human) that has been N-glycosylated at the residue equivalent to Asn-785 of the amino acid sequence represented by UniProtKB:P12110-1, in which the glycan composition is represented by GlyTouCan:G01650EU. Example: UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G01650EU." [GlyGen:P12110-1, PMID:29741879, PRO:DNx]
comment: Category=organism-modification. Requested by=GlyGen.
synonym: "hCOL6A2/NGlyco:2" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P12110-1, Asn-785, MOD:00160~GNO:G01650EU" NARROW PRO-proteoform-std [PRO:DNx]
is_a: PR:P12110 ! collagen alpha-2(VI) chain (human)
relationship: has_part GNO:G01650EU ! G01650EU
relationship: has_part MOD:00160 ! N4-glycosyl-L-asparagine
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000054957
name: collagen alpha-2(VI) chain N-glycosylated 1 (human)
def: "A collagen alpha-2(VI) chain (human) that has been N-glycosylated at the residue equivalent to Asn-140 of the amino acid sequence represented by UniProtKB:P12110-1, in which the glycan composition is represented by GlyTouCan:G25079LO. Example: UniProtKB:P12110-1, Asn-140, MOD:00160~GNO:G25079LO." [GlyGen:P12110-1, PMID:29741879, PRO:DNx]
comment: Category=organism-modification. Requested by=GlyGen.
synonym: "hCOL6A2/NGlyco:1" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:P12110-1, Asn-140, MOD:00160~GNO:G25079LO" NARROW PRO-proteoform-std [PRO:DNx]
is_a: PR:P12110 ! collagen alpha-2(VI) chain (human)
relationship: has_part GNO:G25079LO ! G25079LO
relationship: has_part MOD:00160 ! N4-glycosyl-L-asparagine
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens