[Term]
id: PR:P84244-1
name: histone H3.3 isoform 1 (mouse)
def: "A histone H3.3 isoform 1 that is encoded in the genome of mouse." [PRO:DNx]
comment: Category=organism-sequence.
synonym: "mH3.3/iso:1" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:P84244-1
intersection_of: only_in_taxon NCBITaxon:10090 ! Mus musculus
intersection_of: PR:000040180 ! histone H3.3 isoform 1

[Term]
id: PR:P68433
name: histone H3.1 (mouse)
def: "A histone H3 that is a translation product of any of the following genes in mouse: H3c1/H3c8/H3c10/H3c11." [PRO:DNx, UniProtKB:P68433]
comment: Category=organism-gene. Note: The H3c1, H3c8, H3c10, and H3c11 genes encode identical proteins.
synonym: "H3a" NARROW Gene-based [PRO:DAN, UniProtKB:P68433]
synonym: "H3g" NARROW Gene-based [PRO:DAN, UniProtKB:P68433]
synonym: "H3h" NARROW Gene-based [PRO:DAN, UniProtKB:P68433]
synonym: "H3i" NARROW Gene-based [PRO:DAN, UniProtKB:P68433]
synonym: "H3c1" NARROW Gene-based [PRO:DAN, UniProtKB:P68433]
synonym: "H3c8" NARROW Gene-based [PRO:DAN, UniProtKB:P68433]
synonym: "H3c10" NARROW Gene-based [PRO:DAN, UniProtKB:P68433]
synonym: "H3c11" NARROW Gene-based [PRO:DAN, UniProtKB:P68433]
synonym: "H3.1-I" NARROW Gene-based [PRO:DAN, UniProtKB:P68433]
synonym: "H3.1-221" NARROW Gene-based [PRO:DAN, UniProtKB:P68433]
synonym: "H3.1-291" NARROW Gene-based [PRO:DAN, UniProtKB:P68433]
synonym: "Hist1h3a" NARROW Gene-based [PRO:DAN, UniProtKB:P68433]
synonym: "Hist1h3g" NARROW Gene-based [PRO:DAN, UniProtKB:P68433]
synonym: "Hist1h3h" NARROW Gene-based [PRO:DAN, UniProtKB:P68433]
synonym: "Hist1h3i" NARROW Gene-based [PRO:DAN, UniProtKB:P68433]
synonym: "mH3c[1/8/10/11]" EXACT PRO-short-label [PRO:DNx]
synonym: "mHist1h3[a/g/h/i]" EXACT [PRO:DAN]
xref: UniProtKB:P68433
is_a: PR:000027594 ! histone H3
relationship: has_gene_template MGI:2145541 ! H3c8 (mouse)
relationship: has_gene_template MGI:2448349 ! H3c10 (mouse)
relationship: has_gene_template MGI:2448350 ! H3c11 (mouse)
relationship: has_gene_template MGI:2668828 ! H3c1 (mouse)
relationship: only_in_taxon NCBITaxon:10090 ! Mus musculus

[Term]
id: PR:000036798
name: histone H3.2 acetylated and methylated 3 (mouse)
def: "A histone H3.2 acetylated and methylated form in mouse that has been trimethylated at positions equivalent to Lys-10 and Lys-37, methylated at Lys-19, and acetylated at Lys-24 and Lys-28 of the amino acid sequence represented by UniProtKB:P84228. UniProtKB:P84228, Met-1, MOD:00058|Lys-10/Lys-37, MOD:00083|Lys-19, MOD:00085|Lys-24/Lys-28, MOD:00064." [PRO:CNA, PRO:DAN, TDR:9718]
comment: Category=organism-modification. Note: Top down proteomics. Evidence=(ECO:0000006).
synonym: "mH3.2(any)/AcMe:3" EXACT PRO-short-label [PRO:DAN]
synonym: "UniProtKB:P84228, Met-1, MOD:00058|Lys-10/Lys-37, MOD:00083|Lys-19, MOD:00085|Lys-24/Lys-28, MOD:00064" EXACT PRO-proteoform-std [PRO:DNx]
xref: TDR:9718
is_a: PR:000036795 ! histone H3.2 acetylated and methylated form
relationship: has_part MOD:00058 ! N-acetyl-L-methionine
relationship: has_part MOD:00064 ! N6-acetyl-L-lysine
relationship: has_part MOD:00083 ! N6,N6,N6-trimethyl-L-lysine
relationship: has_part MOD:00085 ! N6-methyl-L-lysine
relationship: only_in_taxon NCBITaxon:10090 ! Mus musculus

[Term]
id: PR:000036797
name: histone H3.2 acetylated and trimethylated 2 (mouse)
def: "A histone H3.2 acetylated and methylated form in mouse that has been trimethylated at the position equivalent to Lys-10 and acetylated on Lys-19 and Lys-37 of the amino acid sequence represented by UniProtKB:P84228. UniProtKB:P84228, Met-1, MOD:00058|Lys-10, MOD:00083|Lys-19/Lys-37, MOD:00064." [PRO:CNA, PRO:DAN, TDR:8813]
comment: Category=organism-modification. Note: Top down proteomics. Evidence=(ECO:0000006).
synonym: "mH3.2(any)/AcMe3:2" EXACT PRO-short-label [PRO:DAN]
synonym: "UniProtKB:P84228, Met-1, MOD:00058|Lys-10, MOD:00083|Lys-19/Lys-37, MOD:00064" EXACT PRO-proteoform-std [PRO:DNx]
xref: TDR:8813
is_a: PR:000036795 ! histone H3.2 acetylated and methylated form
relationship: has_part MOD:00058 ! N-acetyl-L-methionine
relationship: has_part MOD:00064 ! N6-acetyl-L-lysine
relationship: has_part MOD:00083 ! N6,N6,N6-trimethyl-L-lysine
relationship: only_in_taxon NCBITaxon:10090 ! Mus musculus

[Term]
id: PR:000036796
name: histone H3.2 acetylated and trimethylated 1 (mouse)
def: "A histone H3.2 acetylated and methylated form in mouse that has been trimethylated at the position equivalent to Lys-10 of the amino acid sequence represented by UniProtKB:P84228. UniProtKB:P84228, Met-1, MOD:00058|Lys-10, MOD:00083." [PRO:CNA, PRO:DAN, TDR:9434]
comment: Category=organism-modification.
synonym: "mH3.2(any)/AcMe3:1" EXACT PRO-short-label [PRO:DAN]
synonym: "UniProtKB:P84228, Met-1, MOD:00058|Lys-10, MOD:00083" EXACT PRO-proteoform-std [PRO:DNx]
xref: TDR:9425
is_a: PR:000036795 ! histone H3.2 acetylated and methylated form
relationship: has_part MOD:00058 ! N-acetyl-L-methionine
relationship: has_part MOD:00083 ! N6,N6,N6-trimethyl-L-lysine
relationship: only_in_taxon NCBITaxon:10090 ! Mus musculus

[Term]
id: PR:000036801
name: histone H3.3 acetylated and methylated 1 (mouse)
def: "A histone H3.3 that has been acetylated on the N-terminal Met and methylated and acetylated on several Lys residues in mouse. UniProtKB:P84244, Met-1, MOD:00058|Lys-10, MOD:00083|Lys-19, MOD:00085|Lys-28, MOD:00064." []
comment: Category=organism-modification. Note: Top down proteomics. Evidence=(ECO:0000006). Originally based on an early version of TDR:9203 (but is now not connected to that identifier).
synonym: "mH3.3/AcMe:1" EXACT PRO-short-label [PRO:DAN]
synonym: "UniProtKB:P84244, Met-1, MOD:00058|Lys-10, MOD:00083|Lys-19, MOD:00085|Lys-28, MOD:00064" EXACT PRO-proteoform-std [PRO:DNx]
is_a: PR:000008425 ! histone H3.3
relationship: has_part MOD:00058 ! N-acetyl-L-methionine
relationship: has_part MOD:00064 ! N6-acetyl-L-lysine
relationship: has_part MOD:00083 ! N6,N6,N6-trimethyl-L-lysine
relationship: has_part MOD:00085 ! N6-methyl-L-lysine
relationship: only_in_taxon NCBITaxon:10090 ! Mus musculus

[Term]
id: PR:000036803
name: histone H3.3 acetylated and trimethylated 3 (mouse)
def: "A histone H3.3 that has been acetylated on the N-terminal Met and trimethylated on several Lys residues in mouse. UniProtKB:P84244, Met-1, MOD:00058|Lys-10/Lys-28/Lys-37, MOD:00083." []
comment: Category=organism-modification. Note: Top down proteomics. Evidence=(ECO:0000006). Originally based on an early version of TDR:9256 (but is now not connected to that identifier).
synonym: "mH3.3/AcMe3:3" EXACT PRO-short-label [PRO:DAN]
synonym: "UniProtKB:P84244, Met-1, MOD:00058|Lys-10/Lys-28/Lys-37, MOD:00083" EXACT PRO-proteoform-std [PRO:DNx]
is_a: PR:000008425 ! histone H3.3
relationship: has_part MOD:00058 ! N-acetyl-L-methionine
relationship: has_part MOD:00083 ! N6,N6,N6-trimethyl-L-lysine
relationship: only_in_taxon NCBITaxon:10090 ! Mus musculus

[Term]
id: PR:000036802
name: histone H3.3 acetylated and methylated 2 (mouse)
def: "A histone H3.3 that has been acetylated on the N-terminal Met and methylated on several Lys residues in mouse. UniProtKB:P84244, Met-1, MOD:00058|Lys-10/Lys-28, MOD:00083|Lys-19, MOD:00085." []
comment: Category=organism-modification. Note: Top down proteomics. Evidence=(ECO:0000006). Originally based on an early version of TDR:9332 (but is now not connected to that identifier).
synonym: "mH3.3/AcMe:2" EXACT PRO-short-label [PRO:DAN]
synonym: "UniProtKB:P84244, Met-1, MOD:00058|Lys-10/Lys-28, MOD:00083|Lys-19, MOD:00085" EXACT PRO-proteoform-std [PRO:DNx]
is_a: PR:000008425 ! histone H3.3
relationship: has_part MOD:00058 ! N-acetyl-L-methionine
relationship: has_part MOD:00083 ! N6,N6,N6-trimethyl-L-lysine
relationship: has_part MOD:00085 ! N6-methyl-L-lysine
relationship: only_in_taxon NCBITaxon:10090 ! Mus musculus

[Term]
id: PR:000036799
name: histone H3.2 acetylated and methylated 4 (mouse)
def: "A histone H3.2 acetylated and methylated form in mouse that has been trimethylated at the position equivalent to Lys-10, and methylated on Lys-19 and Lys-37 of the amino acid sequence represented by UniProtKB:P84228. UniProtKB:P84228, Met-1, MOD:00058|Lys-10, MOD:00083|Lys-19/Lys-37, MOD:00085." [PRO:CNA, PRO:DAN, TDR:9105]
comment: Category=organism-modification. Note: Top down proteomics. Evidence=(ECO:0000006).
synonym: "mH3.2(any)/AcMe:4" EXACT PRO-short-label [PRO:DAN]
synonym: "UniProtKB:P84228, Met-1, MOD:00058|Lys-10, MOD:00083|Lys-19/Lys-37, MOD:00085" EXACT PRO-proteoform-std [PRO:DNx]
xref: TDR:9105
is_a: PR:000036795 ! histone H3.2 acetylated and methylated form
relationship: has_part MOD:00058 ! N-acetyl-L-methionine
relationship: has_part MOD:00083 ! N6,N6,N6-trimethyl-L-lysine
relationship: has_part MOD:00085 ! N6-methyl-L-lysine
relationship: only_in_taxon NCBITaxon:10090 ! Mus musculus

[Term]
id: PR:000027594
name: histone H3
def: "A core histone that is a translation product of one of the H3 gene variants. It is a core histone and contains a copy of the Histone (Pfam:PF00125) domain at its C-terminus." [PMID:18443735, PMID:19234519, PRO:CNA]
comment: Category=family.
synonym: "H3(any)" EXACT PRO-short-label [PRO:DAN]
xref: PIRSF:PIRSF002051
is_a: PR:000043452 ! core histone