[Term]
id: PR:000057642
name: collagen alpha-1(XXVII) chain O-glycosylated 1 (human)
def: "A collagen alpha-1(XXVII) chain (human) that has been O-glycosylated at the residue equivalent to Thr-586 of the amino acid sequence represented by UniProtKB:Q8IZC6-1, in which the glycan composition is represented by GlyTouCan:G53434XO. Example: UniProtKB:Q8IZC6-1, Thr-586, MOD:00005~GNO:G53434XO." [GlyGen:Q8IZC6-1, PMID:30459171, PRO:DNx]
comment: Category=organism-modification. Requested by=GlyGen.
synonym: "hCOL27A1/OGlyco:1" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:Q8IZC6-1, Thr-586, MOD:00005~GNO:G53434XO" NARROW PRO-proteoform-std [PRO:DNx]
is_a: PR:Q8IZC6 ! collagen alpha-1(XXVII) chain (human)
relationship: has_part GNO:G53434XO ! G53434XO
relationship: has_part MOD:00005 ! O-glycosyl-L-threonine
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000046874
name: collagen alpha-1(XXVII) chain, signal peptide removed 5-hydroxy-lysine and 4-hydroxy-proline form (human)
def: "A collagen alpha-1(XXVII) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine and at least one 4-hydroxy-proline. UniProtKB:Q8IZC6, 42-1860, MOD:00037|MOD:00039." [PRO:DNx, Reactome:R-HSA-2173160, Reactome:R-HSA-2268910]
comment: Category=organism-modification.
synonym: "hCOL27A1/SigPep-/5hL4hP+" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:Q8IZC6, 42-1860, MOD:00037|MOD:00039" EXACT PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-2173160 "PR:000046874 located_in GO:0005788"
xref: Reactome:R-HSA-2268910 "PR:000046874 located_in GO:0005576"
intersection_of: has_part MOD:00037 ! 5-hydroxy-L-lysine
intersection_of: has_part MOD:00039 ! 4-hydroxy-L-proline
intersection_of: PR:Q8IZC6 ! collagen alpha-1(XXVII) chain (human)
intersection_of: lacks_part SO:0000418 ! signal_peptide
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:Q80ZF0
name: collagen alpha-1(XXVII) chain (rat)
def: "A collagen alpha-1(XXVII) chain that is encoded in the genome of rat." [OMA:Q80ZF0, PANTHER:PTHR24023:SF113, PRO:DNx]
comment: Category=organism-gene.
synonym: "Col27a1" RELATED Gene-based [UniProtKB:Q80ZF0]
synonym: "rCOL27A1" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:Q80ZF0
intersection_of: only_in_taxon NCBITaxon:10116 ! Rattus norvegicus
intersection_of: PR:000005710 ! collagen alpha-1(XXVII) chain
relationship: has_gene_template RGD:735115 ! Col27a1 (rat)

[Term]
id: PR:Q8IZC6-3
name: collagen alpha-1(XXVII) chain isoform h3 (human)
def: "A collagen alpha-1(XXVII) chain (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8IZC6-3." [PRO:DNx, UniProtKB:Q8IZC6]
comment: Category=organism-sequence.
synonym: "hCOL27A1/iso:h3" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:Q8IZC6-3
is_a: PR:Q8IZC6 ! collagen alpha-1(XXVII) chain (human)
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:Q5QNQ9
name: collagen alpha-1(XXVII) chain (mouse)
def: "A collagen alpha-1(XXVII) chain that is encoded in the genome of mouse." [OMA:Q5QNQ9, PRO:DNx]
comment: Category=organism-gene.
synonym: "Col27a1" RELATED Gene-based [UniProtKB:Q5QNQ9]
synonym: "Kiaa1870" RELATED Gene-based [UniProtKB:Q5QNQ9]
synonym: "mCOL27A1" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:Q5QNQ9
intersection_of: only_in_taxon NCBITaxon:10090 ! Mus musculus
intersection_of: PR:000005710 ! collagen alpha-1(XXVII) chain
relationship: has_gene_template MGI:2672118 ! Col27a1 (mouse)

[Term]
id: PR:C7DZK3
name: collagen alpha-1(XXVII) chain A (zebrafish)
def: "A collagen alpha-1(XXVII) chain that is encoded in the genome of zebrafish." [PRO:DNx]
comment: Category=organism-gene.
synonym: "col27a1a" RELATED Gene-based [UniProtKB:C7DZK3]
synonym: "z-COL27A1" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:C7DZK3
intersection_of: only_in_taxon NCBITaxon:7955 ! Danio rerio
intersection_of: PR:000005710 ! collagen alpha-1(XXVII) chain
relationship: has_gene_template ZFIN:ZDB-GENE-100119-1 ! col27a1a (zebrafish)

[Term]
id: PR:000019404
name: collagen alpha-1(XXVII) chain proteolytic cleavage product
def: "A collagen alpha-1(XXVII) chain that has been processed by proteolytic cleavage." [PRO:DNx]
comment: Category=modification.
synonym: "COL27A1/ClvPrd" EXACT PRO-short-label [PRO:DNx]
intersection_of: output_of GO:0016485 ! protein processing
intersection_of: PR:000005710 ! collagen alpha-1(XXVII) chain

[Term]
id: PR:Q8IZC6-2
name: collagen alpha-1(XXVII) chain isoform h2 (human)
def: "A collagen alpha-1(XXVII) chain (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8IZC6-2." [PRO:DNx, UniProtKB:Q8IZC6]
comment: Category=organism-sequence.
synonym: "hCOL27A1/iso:h2" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:Q8IZC6-2
is_a: PR:Q8IZC6 ! collagen alpha-1(XXVII) chain (human)
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:Q8IZC6-1
name: collagen alpha-1(XXVII) chain isoform h1 (human)
def: "A collagen alpha-1(XXVII) chain (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8IZC6-1." [PRO:DNx, UniProtKB:Q8IZC6]
comment: Category=organism-sequence.
synonym: "hCOL27A1/iso:h1" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:Q8IZC6-1
is_a: PR:Q8IZC6 ! collagen alpha-1(XXVII) chain (human)
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000005710
name: collagen alpha-1(XXVII) chain
def: "A protein that is a translation product of the human COL27A1 gene or a 1:1 ortholog thereof." [PRO:DNx]
comment: Category=gene.
synonym: "COL27A1" EXACT PRO-short-label [PRO:DNx]
synonym: "KIAA1870" RELATED Gene-based []
is_a: PR:000000001 ! protein

[Term]
id: PR:000046873
name: collagen alpha-1(XXVII) chain, signal peptide removed 5-hydroxy-lysine, 3-hydroxy-proline and 4-hydroxy-proline form (human)
def: "A collagen alpha-1(XXVII) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine, at least one 3-hydroxy-proline and at least one 4-hydroxy-proline. UniProtKB:Q8IZC6, 42-1860, MOD:00037|MOD:00038|MOD:00039." [PRO:DNx, Reactome:R-HSA-2173212, Reactome:R-HSA-2268909]
comment: Category=organism-modification.
synonym: "hCOL27A1/SigPep-/5hL3hP4hP+" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:Q8IZC6, 42-1860, MOD:00037|MOD:00038|MOD:00039" EXACT PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-2173212 "PR:000046873 located_in GO:0005788"
xref: Reactome:R-HSA-2268909 "PR:000046873 located_in GO:0005576"
intersection_of: has_part MOD:00037 ! 5-hydroxy-L-lysine
intersection_of: has_part MOD:00038 ! 3-hydroxy-L-proline
intersection_of: has_part MOD:00039 ! 4-hydroxy-L-proline
intersection_of: PR:Q8IZC6 ! collagen alpha-1(XXVII) chain (human)
intersection_of: lacks_part SO:0000418 ! signal_peptide
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000046872
name: collagen alpha-1(XXVII) chain, signal peptide removed 5-hydroxy-lysine form (human)
def: "A collagen alpha-1(XXVII) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine. UniProtKB:Q8IZC6, 42-1860, MOD:00037." [PRO:DNx, Reactome:R-HSA-2173008, Reactome:R-HSA-2268880]
comment: Category=organism-modification.
synonym: "hCOL27A1/SigPep-/5HyLys+" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:Q8IZC6, 42-1860, MOD:00037" EXACT PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-2173008 "PR:000046872 located_in GO:0005788"
xref: Reactome:R-HSA-2268880 "PR:000046872 located_in GO:0005576"
intersection_of: has_part MOD:00037 ! 5-hydroxy-L-lysine
intersection_of: PR:Q8IZC6 ! collagen alpha-1(XXVII) chain (human)
intersection_of: lacks_part SO:0000418 ! signal_peptide
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000046871
name: collagen alpha-1(XXVII) chain, signal peptide removed 4-hydroxy-proline form (human)
def: "A collagen alpha-1(XXVII) chain (human) that has had the signal peptide removed and that includes at least one 4-hydroxy-proline. UniProtKB:Q8IZC6, 42-1860, MOD:00039." [PRO:DNx, Reactome:R-HSA-2172955, Reactome:R-HSA-2268748]
comment: Category=organism-modification.
synonym: "hCOL27A1/SigPep-/4HyPro+" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:Q8IZC6, 42-1860, MOD:00039" EXACT PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-2172955 "PR:000046871 located_in GO:0005788"
xref: Reactome:R-HSA-2268748 "PR:000046871 located_in GO:0005576"
intersection_of: has_part MOD:00039 ! 4-hydroxy-L-proline
intersection_of: PR:Q8IZC6 ! collagen alpha-1(XXVII) chain (human)
intersection_of: lacks_part SO:0000418 ! signal_peptide
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:000046870
name: collagen alpha-1(XXVII) chain, signal peptide removed 3-hydroxy-proline and 4-hydroxy-proline form (human)
def: "A collagen alpha-1(XXVII) chain (human) that has had the signal peptide removed and that includes at least one 3-hydroxy-proline and at least one 4-hydroxy-proline. UniProtKB:Q8IZC6, 42-1860, MOD:00038|MOD:00039." [PRO:DNx, Reactome:R-HSA-2172990, Reactome:R-HSA-2268758]
comment: Category=organism-modification.
synonym: "hCOL27A1/SigPep-/3hP4hP+" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:Q8IZC6, 42-1860, MOD:00038|MOD:00039" EXACT PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-2172990 "PR:000046870 located_in GO:0005788"
xref: Reactome:R-HSA-2268758 "PR:000046870 located_in GO:0005576"
intersection_of: has_part MOD:00038 ! 3-hydroxy-L-proline
intersection_of: has_part MOD:00039 ! 4-hydroxy-L-proline
intersection_of: PR:Q8IZC6 ! collagen alpha-1(XXVII) chain (human)
intersection_of: lacks_part SO:0000418 ! signal_peptide
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens

[Term]
id: PR:Q8IZC6
name: collagen alpha-1(XXVII) chain (human)
def: "A collagen alpha-1(XXVII) chain that is encoded in the genome of human." [PRO:DNx, UniProtKB:Q8IZC6]
comment: Category=organism-gene.
synonym: "COL27A1" RELATED Gene-based [UniProtKB:Q8IZC6]
synonym: "KIAA1870" RELATED Gene-based [UniProtKB:Q8IZC6]
synonym: "hCOL27A1" EXACT PRO-short-label [PRO:DNx]
xref: UniProtKB:Q8IZC6
intersection_of: only_in_taxon NCBITaxon:9606 ! Homo sapiens
intersection_of: PR:000005710 ! collagen alpha-1(XXVII) chain
relationship: has_gene_template HGNC:22986 ! COL27A1 (human)

[Term]
id: PR:000046869
name: collagen alpha-1(XXVII) chain, signal peptide removed form (human)
def: "A collagen alpha-1(XXVII) chain (human) that has had the signal peptide removed. UniProtKB:Q8IZC6, 42-1860." [PRO:DNx, Reactome:R-HSA-2172350, Reactome:R-HSA-2268899]
comment: Category=organism-modification.
synonym: "hCOL27A1/SigPep-" EXACT PRO-short-label [PRO:DNx]
synonym: "UniProtKB:Q8IZC6, 42-1860" EXACT PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-2172350 "PR:000046869 located_in GO:0005788"
xref: Reactome:R-HSA-2268899 "PR:000046869 located_in GO:0005576"
intersection_of: PR:Q8IZC6 ! collagen alpha-1(XXVII) chain (human)
intersection_of: lacks_part SO:0000418 ! signal_peptide
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens