[Term] id: PR:000057642 name: collagen alpha-1(XXVII) chain O-glycosylated 1 (human) def: "A collagen alpha-1(XXVII) chain (human) that has been O-glycosylated at the residue equivalent to Thr-586 of the amino acid sequence represented by UniProtKB:Q8IZC6-1, in which the glycan composition is represented by GlyTouCan:G53434XO. Example: UniProtKB:Q8IZC6-1, Thr-586, MOD:00005~GNO:G53434XO." [GlyGen:Q8IZC6-1, PMID:30459171, PRO:DNx] comment: Category=organism-modification. Requested by=GlyGen. synonym: "hCOL27A1/OGlyco:1" EXACT PRO-short-label [PRO:DNx] synonym: "UniProtKB:Q8IZC6-1, Thr-586, MOD:00005~GNO:G53434XO" NARROW PRO-proteoform-std [PRO:DNx] is_a: PR:Q8IZC6 ! collagen alpha-1(XXVII) chain (human) relationship: has_part GNO:G53434XO ! G53434XO relationship: has_part MOD:00005 ! O-glycosyl-L-threonine relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: PR:000046874 name: collagen alpha-1(XXVII) chain, signal peptide removed 5-hydroxy-lysine and 4-hydroxy-proline form (human) def: "A collagen alpha-1(XXVII) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine and at least one 4-hydroxy-proline. UniProtKB:Q8IZC6, 42-1860, MOD:00037|MOD:00039." [PRO:DNx, Reactome:R-HSA-2173160, Reactome:R-HSA-2268910] comment: Category=organism-modification. synonym: "hCOL27A1/SigPep-/5hL4hP+" EXACT PRO-short-label [PRO:DNx] synonym: "UniProtKB:Q8IZC6, 42-1860, MOD:00037|MOD:00039" EXACT PRO-proteoform-std [PRO:DNx] xref: Reactome:R-HSA-2173160 "PR:000046874 located_in GO:0005788" xref: Reactome:R-HSA-2268910 "PR:000046874 located_in GO:0005576" intersection_of: has_part MOD:00037 ! 5-hydroxy-L-lysine intersection_of: has_part MOD:00039 ! 4-hydroxy-L-proline intersection_of: PR:Q8IZC6 ! collagen alpha-1(XXVII) chain (human) intersection_of: lacks_part SO:0000418 ! signal_peptide relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: PR:Q8IZC6-3 name: collagen alpha-1(XXVII) chain isoform h3 (human) def: "A collagen alpha-1(XXVII) chain (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8IZC6-3." [PRO:DNx, UniProtKB:Q8IZC6] comment: Category=organism-sequence. synonym: "hCOL27A1/iso:h3" EXACT PRO-short-label [PRO:DNx] xref: UniProtKB:Q8IZC6-3 is_a: PR:Q8IZC6 ! collagen alpha-1(XXVII) chain (human) relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: PR:Q8IZC6-2 name: collagen alpha-1(XXVII) chain isoform h2 (human) def: "A collagen alpha-1(XXVII) chain (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8IZC6-2." [PRO:DNx, UniProtKB:Q8IZC6] comment: Category=organism-sequence. synonym: "hCOL27A1/iso:h2" EXACT PRO-short-label [PRO:DNx] xref: UniProtKB:Q8IZC6-2 is_a: PR:Q8IZC6 ! collagen alpha-1(XXVII) chain (human) relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: PR:Q8IZC6-1 name: collagen alpha-1(XXVII) chain isoform h1 (human) def: "A collagen alpha-1(XXVII) chain (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8IZC6-1." [PRO:DNx, UniProtKB:Q8IZC6] comment: Category=organism-sequence. synonym: "hCOL27A1/iso:h1" EXACT PRO-short-label [PRO:DNx] xref: UniProtKB:Q8IZC6-1 is_a: PR:Q8IZC6 ! collagen alpha-1(XXVII) chain (human) relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: PR:000005710 name: collagen alpha-1(XXVII) chain def: "A protein that is a translation product of the human COL27A1 gene or a 1:1 ortholog thereof." [PRO:DNx] comment: Category=gene. synonym: "COL27A1" EXACT PRO-short-label [PRO:DNx] synonym: "KIAA1870" RELATED Gene-based [] is_a: PR:000000001 ! protein [Term] id: PR:000046873 name: collagen alpha-1(XXVII) chain, signal peptide removed 5-hydroxy-lysine, 3-hydroxy-proline and 4-hydroxy-proline form (human) def: "A collagen alpha-1(XXVII) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine, at least one 3-hydroxy-proline and at least one 4-hydroxy-proline. UniProtKB:Q8IZC6, 42-1860, MOD:00037|MOD:00038|MOD:00039." [PRO:DNx, Reactome:R-HSA-2173212, Reactome:R-HSA-2268909] comment: Category=organism-modification. synonym: "hCOL27A1/SigPep-/5hL3hP4hP+" EXACT PRO-short-label [PRO:DNx] synonym: "UniProtKB:Q8IZC6, 42-1860, MOD:00037|MOD:00038|MOD:00039" EXACT PRO-proteoform-std [PRO:DNx] xref: Reactome:R-HSA-2173212 "PR:000046873 located_in GO:0005788" xref: Reactome:R-HSA-2268909 "PR:000046873 located_in GO:0005576" intersection_of: has_part MOD:00037 ! 5-hydroxy-L-lysine intersection_of: has_part MOD:00038 ! 3-hydroxy-L-proline intersection_of: has_part MOD:00039 ! 4-hydroxy-L-proline intersection_of: PR:Q8IZC6 ! collagen alpha-1(XXVII) chain (human) intersection_of: lacks_part SO:0000418 ! signal_peptide relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: PR:000046872 name: collagen alpha-1(XXVII) chain, signal peptide removed 5-hydroxy-lysine form (human) def: "A collagen alpha-1(XXVII) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine. UniProtKB:Q8IZC6, 42-1860, MOD:00037." [PRO:DNx, Reactome:R-HSA-2173008, Reactome:R-HSA-2268880] comment: Category=organism-modification. synonym: "hCOL27A1/SigPep-/5HyLys+" EXACT PRO-short-label [PRO:DNx] synonym: "UniProtKB:Q8IZC6, 42-1860, MOD:00037" EXACT PRO-proteoform-std [PRO:DNx] xref: Reactome:R-HSA-2173008 "PR:000046872 located_in GO:0005788" xref: Reactome:R-HSA-2268880 "PR:000046872 located_in GO:0005576" intersection_of: has_part MOD:00037 ! 5-hydroxy-L-lysine intersection_of: PR:Q8IZC6 ! collagen alpha-1(XXVII) chain (human) intersection_of: lacks_part SO:0000418 ! signal_peptide relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: PR:000046871 name: collagen alpha-1(XXVII) chain, signal peptide removed 4-hydroxy-proline form (human) def: "A collagen alpha-1(XXVII) chain (human) that has had the signal peptide removed and that includes at least one 4-hydroxy-proline. UniProtKB:Q8IZC6, 42-1860, MOD:00039." [PRO:DNx, Reactome:R-HSA-2172955, Reactome:R-HSA-2268748] comment: Category=organism-modification. synonym: "hCOL27A1/SigPep-/4HyPro+" EXACT PRO-short-label [PRO:DNx] synonym: "UniProtKB:Q8IZC6, 42-1860, MOD:00039" EXACT PRO-proteoform-std [PRO:DNx] xref: Reactome:R-HSA-2172955 "PR:000046871 located_in GO:0005788" xref: Reactome:R-HSA-2268748 "PR:000046871 located_in GO:0005576" intersection_of: has_part MOD:00039 ! 4-hydroxy-L-proline intersection_of: PR:Q8IZC6 ! collagen alpha-1(XXVII) chain (human) intersection_of: lacks_part SO:0000418 ! signal_peptide relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: PR:000046870 name: collagen alpha-1(XXVII) chain, signal peptide removed 3-hydroxy-proline and 4-hydroxy-proline form (human) def: "A collagen alpha-1(XXVII) chain (human) that has had the signal peptide removed and that includes at least one 3-hydroxy-proline and at least one 4-hydroxy-proline. UniProtKB:Q8IZC6, 42-1860, MOD:00038|MOD:00039." [PRO:DNx, Reactome:R-HSA-2172990, Reactome:R-HSA-2268758] comment: Category=organism-modification. synonym: "hCOL27A1/SigPep-/3hP4hP+" EXACT PRO-short-label [PRO:DNx] synonym: "UniProtKB:Q8IZC6, 42-1860, MOD:00038|MOD:00039" EXACT PRO-proteoform-std [PRO:DNx] xref: Reactome:R-HSA-2172990 "PR:000046870 located_in GO:0005788" xref: Reactome:R-HSA-2268758 "PR:000046870 located_in GO:0005576" intersection_of: has_part MOD:00038 ! 3-hydroxy-L-proline intersection_of: has_part MOD:00039 ! 4-hydroxy-L-proline intersection_of: PR:Q8IZC6 ! collagen alpha-1(XXVII) chain (human) intersection_of: lacks_part SO:0000418 ! signal_peptide relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: PR:Q8IZC6 name: collagen alpha-1(XXVII) chain (human) def: "A collagen alpha-1(XXVII) chain that is encoded in the genome of human." [PRO:DNx, UniProtKB:Q8IZC6] comment: Category=organism-gene. synonym: "COL27A1" RELATED Gene-based [UniProtKB:Q8IZC6] synonym: "KIAA1870" RELATED Gene-based [UniProtKB:Q8IZC6] synonym: "hCOL27A1" EXACT PRO-short-label [PRO:DNx] xref: UniProtKB:Q8IZC6 intersection_of: only_in_taxon NCBITaxon:9606 ! Homo sapiens intersection_of: PR:000005710 ! collagen alpha-1(XXVII) chain relationship: has_gene_template HGNC:22986 ! COL27A1 (human) [Term] id: PR:000046869 name: collagen alpha-1(XXVII) chain, signal peptide removed form (human) def: "A collagen alpha-1(XXVII) chain (human) that has had the signal peptide removed. UniProtKB:Q8IZC6, 42-1860." [PRO:DNx, Reactome:R-HSA-2172350, Reactome:R-HSA-2268899] comment: Category=organism-modification. synonym: "hCOL27A1/SigPep-" EXACT PRO-short-label [PRO:DNx] synonym: "UniProtKB:Q8IZC6, 42-1860" EXACT PRO-proteoform-std [PRO:DNx] xref: Reactome:R-HSA-2172350 "PR:000046869 located_in GO:0005788" xref: Reactome:R-HSA-2268899 "PR:000046869 located_in GO:0005576" intersection_of: PR:Q8IZC6 ! collagen alpha-1(XXVII) chain (human) intersection_of: lacks_part SO:0000418 ! signal_peptide relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens