[Term] id: PR:Q8C6K9-1 name: collagen alpha-6(VI) chain isoform m1 (mouse) def: "A collagen alpha-6(VI) chain (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8C6K9-1." [PRO:DNx, UniProtKB:Q8C6K9] comment: Category=organism-sequence. synonym: "mCOL6A6/iso:m1" EXACT PRO-short-label [PRO:DNx] xref: UniProtKB:Q8C6K9-1 is_a: PR:Q8C6K9 ! collagen alpha-6(VI) chain (mouse) relationship: only_in_taxon NCBITaxon:10090 ! Mus musculus [Term] id: PR:Q8C6K9-2 name: collagen alpha-6(VI) chain isoform m2 (mouse) def: "A collagen alpha-6(VI) chain (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8C6K9-2." [PRO:DNx, UniProtKB:Q8C6K9] comment: Category=organism-sequence. synonym: "mCOL6A6/iso:m2" EXACT PRO-short-label [PRO:DNx] xref: UniProtKB:Q8C6K9-2 is_a: PR:Q8C6K9 ! collagen alpha-6(VI) chain (mouse) relationship: only_in_taxon NCBITaxon:10090 ! Mus musculus [Term] id: PR:000046984 name: collagen alpha-6(VI) chain, signal peptide removed 5-hydroxy-lysine and 4-hydroxy-proline form (human) def: "A collagen alpha-6(VI) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine and at least one 4-hydroxy-proline. UniProtKB:A6NMZ7, 20-2263, MOD:00037|MOD:00039." [PRO:DNx, Reactome:R-HSA-2023502, Reactome:R-HSA-2127537] comment: Category=organism-modification. synonym: "hCOL6A6/SigPep-/5hL4hP+" EXACT PRO-short-label [PRO:DNx] synonym: "PRO_5000266306, MOD:00037|MOD:00039" EXACT PRO-proteoform-ftid [PRO:DNx] synonym: "UniProtKB:A6NMZ7, 20-2263, MOD:00037|MOD:00039" EXACT PRO-proteoform-std [PRO:DNx] xref: Reactome:R-HSA-2023502 "PR:000046984 located_in GO:0005788" xref: Reactome:R-HSA-2127537 "PR:000046984 located_in GO:0005576" intersection_of: has_part MOD:00037 ! 5-hydroxy-L-lysine intersection_of: has_part MOD:00039 ! 4-hydroxy-L-proline intersection_of: PR:A6NMZ7 ! collagen alpha-6(VI) chain (human) intersection_of: lacks_part SO:0000418 ! signal_peptide relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: PR:000046983 name: collagen alpha-6(VI) chain, signal peptide removed 5-hydroxy-lysine, 3-hydroxy-proline and 4-hydroxy-proline form (human) def: "A collagen alpha-6(VI) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine, at least one 3-hydroxy-proline and at least one 4-hydroxy-proline. UniProtKB:A6NMZ7, 20-2263, MOD:00037|MOD:00038|MOD:00039." [PRO:DNx, Reactome:R-HSA-2023493, Reactome:R-HSA-2127462] comment: Category=organism-modification. synonym: "hCOL6A6/SigPep-/5hL3hP4hP+" EXACT PRO-short-label [PRO:DNx] synonym: "PRO_5000266306, MOD:00037|MOD:00038|MOD:00039" EXACT PRO-proteoform-ftid [PRO:DNx] synonym: "UniProtKB:A6NMZ7, 20-2263, MOD:00037|MOD:00038|MOD:00039" EXACT PRO-proteoform-std [PRO:DNx] xref: Reactome:R-HSA-2023493 "PR:000046983 located_in GO:0005788" xref: Reactome:R-HSA-2127462 "PR:000046983 located_in GO:0005576" xref: Reactome:R-HSA-2470032 "PR:000046983 located_in GO:0005576" intersection_of: has_part MOD:00037 ! 5-hydroxy-L-lysine intersection_of: has_part MOD:00038 ! 3-hydroxy-L-proline intersection_of: has_part MOD:00039 ! 4-hydroxy-L-proline intersection_of: PR:A6NMZ7 ! collagen alpha-6(VI) chain (human) intersection_of: lacks_part SO:0000418 ! signal_peptide relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: PR:000046982 name: collagen alpha-6(VI) chain, signal peptide removed 5-hydroxy-lysine form (human) def: "A collagen alpha-6(VI) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine. UniProtKB:A6NMZ7, 20-2263, MOD:00037." [PRO:DNx, Reactome:R-HSA-2023508, Reactome:R-HSA-2127509] comment: Category=organism-modification. synonym: "hCOL6A6/SigPep-/5HyLys+" EXACT PRO-short-label [PRO:DNx] synonym: "PRO_5000266306, MOD:00037" EXACT PRO-proteoform-ftid [PRO:DNx] synonym: "UniProtKB:A6NMZ7, 20-2263, MOD:00037" EXACT PRO-proteoform-std [PRO:DNx] xref: Reactome:R-HSA-2023508 "PR:000046982 located_in GO:0005788" xref: Reactome:R-HSA-2127509 "PR:000046982 located_in GO:0005576" intersection_of: has_part MOD:00037 ! 5-hydroxy-L-lysine intersection_of: PR:A6NMZ7 ! collagen alpha-6(VI) chain (human) intersection_of: lacks_part SO:0000418 ! signal_peptide relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: PR:000046981 name: collagen alpha-6(VI) chain, signal peptide removed 4-hydroxy-proline form (human) def: "A collagen alpha-6(VI) chain (human) that has had the signal peptide removed and that includes at least one 4-hydroxy-proline. UniProtKB:A6NMZ7, 20-2263, MOD:00039." [PRO:DNx, Reactome:R-HSA-2023501, Reactome:R-HSA-2127529] comment: Category=organism-modification. synonym: "hCOL6A6/SigPep-/4HyPro+" EXACT PRO-short-label [PRO:DNx] synonym: "PRO_5000266306, MOD:00039" EXACT PRO-proteoform-ftid [PRO:DNx] synonym: "UniProtKB:A6NMZ7, 20-2263, MOD:00039" EXACT PRO-proteoform-std [PRO:DNx] xref: Reactome:R-HSA-2023501 "PR:000046981 located_in GO:0005788" xref: Reactome:R-HSA-2127529 "PR:000046981 located_in GO:0005576" intersection_of: has_part MOD:00039 ! 4-hydroxy-L-proline intersection_of: PR:A6NMZ7 ! collagen alpha-6(VI) chain (human) intersection_of: lacks_part SO:0000418 ! signal_peptide relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: PR:000046980 name: collagen alpha-6(VI) chain, signal peptide removed 3-hydroxy-proline and 4-hydroxy-proline form (human) def: "A collagen alpha-6(VI) chain (human) that has had the signal peptide removed and that includes at least one 3-hydroxy-proline and at least one 4-hydroxy-proline. UniProtKB:A6NMZ7, 20-2263, MOD:00038|MOD:00039." [PRO:DNx, Reactome:R-HSA-2023496, Reactome:R-HSA-2127466] comment: Category=organism-modification. synonym: "hCOL6A6/SigPep-/3hP4hP+" EXACT PRO-short-label [PRO:DNx] synonym: "PRO_5000266306, MOD:00038|MOD:00039" EXACT PRO-proteoform-ftid [PRO:DNx] synonym: "UniProtKB:A6NMZ7, 20-2263, MOD:00038|MOD:00039" EXACT PRO-proteoform-std [PRO:DNx] xref: Reactome:R-HSA-2023496 "PR:000046980 located_in GO:0005788" xref: Reactome:R-HSA-2127466 "PR:000046980 located_in GO:0005576" xref: Reactome:R-HSA-2470191 "PR:000046980 located_in GO:0005576" intersection_of: has_part MOD:00038 ! 3-hydroxy-L-proline intersection_of: has_part MOD:00039 ! 4-hydroxy-L-proline intersection_of: PR:A6NMZ7 ! collagen alpha-6(VI) chain (human) intersection_of: lacks_part SO:0000418 ! signal_peptide relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: PR:000046979 name: collagen alpha-6(VI) chain, signal peptide removed form (human) def: "A collagen alpha-6(VI) chain (human) that has had the signal peptide removed. UniProtKB:A6NMZ7, 20-2263." [PRO:DNx, Reactome:R-HSA-2023511, Reactome:R-HSA-2127489] comment: Category=organism-modification. synonym: "PRO_5000266306" EXACT PRO-proteoform-ftid [PRO:DNx] synonym: "hCOL6A6/SigPep-" EXACT PRO-short-label [PRO:DNx] synonym: "UniProtKB:A6NMZ7, 20-2263" EXACT PRO-proteoform-std [PRO:DNx] xref: Reactome:R-HSA-2023511 "PR:000046979 located_in GO:0005788" xref: Reactome:R-HSA-2127489 "PR:000046979 located_in GO:0005576" intersection_of: PR:A6NMZ7 ! collagen alpha-6(VI) chain (human) intersection_of: lacks_part SO:0000418 ! signal_peptide relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: PR:A6NMZ7-1 name: collagen alpha-6(VI) chain isoform h1 (human) def: "A collagen alpha-6(VI) chain (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:A6NMZ7-1." [PRO:DNx, UniProtKB:A6NMZ7] comment: Category=organism-sequence. synonym: "hCOL6A6/iso:h1" EXACT PRO-short-label [PRO:DNx] xref: UniProtKB:A6NMZ7-1 is_a: PR:A6NMZ7 ! collagen alpha-6(VI) chain (human) relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] id: PR:000005719 name: collagen alpha-6(VI) chain def: "A protein that is a translation product of the human COL6A6 gene or a 1:1 ortholog thereof." [PRO:DNx] comment: Category=gene. synonym: "COL6A6" EXACT PRO-short-label [PRO:DNx] is_a: PR:000000001 ! protein [Term] id: PR:Q8C6K9 name: collagen alpha-6(VI) chain (mouse) def: "A collagen alpha-6(VI) chain that is encoded in the genome of mouse." [OMA:Q8C6K9, PRO:DNx] comment: Category=organism-gene. synonym: "Col6a6" RELATED Gene-based [UniProtKB:Q8C6K9] synonym: "mCOL6A6" EXACT PRO-short-label [PRO:DNx] xref: UniProtKB:Q8C6K9 intersection_of: only_in_taxon NCBITaxon:10090 ! Mus musculus intersection_of: PR:000005719 ! collagen alpha-6(VI) chain relationship: has_gene_template MGI:2444259 ! Col6a6 (mouse) [Term] id: PR:A6NMZ7 name: collagen alpha-6(VI) chain (human) def: "A collagen alpha-6(VI) chain that is encoded in the genome of human." [PRO:DNx, UniProtKB:A6NMZ7] comment: Category=organism-gene. synonym: "COL6A6" RELATED Gene-based [UniProtKB:A6NMZ7] synonym: "hCOL6A6" EXACT PRO-short-label [PRO:DNx] xref: UniProtKB:A6NMZ7 intersection_of: only_in_taxon NCBITaxon:9606 ! Homo sapiens intersection_of: PR:000005719 ! collagen alpha-6(VI) chain relationship: has_gene_template HGNC:27023 ! COL6A6 (human) [Term] id: PR:A6NMZ7-2 name: collagen alpha-6(VI) chain isoform h2 (human) def: "A collagen alpha-6(VI) chain (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:A6NMZ7-2." [PRO:DNx, UniProtKB:A6NMZ7] comment: Category=organism-sequence. synonym: "hCOL6A6/iso:h2" EXACT PRO-short-label [PRO:DNx] xref: UniProtKB:A6NMZ7-2 is_a: PR:A6NMZ7 ! collagen alpha-6(VI) chain (human) relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens