[Term]
id: PR:000060290
name: collagen alpha-1(IX) chain, signal peptide removed 4-hydroxy-proline and glucosylgalactosylhydroxylysine form (human)
def: "A collagen alpha-1(IX) chain (human) that has had the signal peptide removed and that includes at least 1 glucosylgalactosylhydroxylated lysine and at least 3 4-hydroxy-prolines. Example: UniProtKB:P20849-1, 24-921, MOD:00039(3+)|MOD:00162." [PRO:DNx, Reactome:R-HSA-2173206, Reactome:R-HSA-2193017]
comment: Category=organism-modification.
synonym: "hCOL9A1/SigPep-/4HyPro(3+)GlcGalHyLys+" EXACT PRO-short-label [PRO:DNx]
synonym: "3x4Hyp-GlcGalHyl-COL9A1" RELATED Reactome-displayName [PRO:DNx, Reactome:R-HSA-2173206, Reactome:R-HSA-2193017]
synonym: "UniProtKB:P20849, 24-921, MOD:00039(3+)|MOD:00162" EXACT PRO-proteoform-std [PRO:DNx]
synonym: "UniProtKB:P20849-1, 24-921, MOD:00039(3+)|MOD:00162" NARROW PRO-proteoform-std [PRO:DNx]
xref: Reactome:R-HSA-2173206 "PR:000060290 located_in GO:0005788"
xref: Reactome:R-HSA-2193017 "PR:000060290 located_in GO:0005576"
is_a: PR:P20849 ! collagen alpha-1(IX) chain (human)
relationship: has_part MOD:00039 ! 4-hydroxy-L-proline
relationship: has_part MOD:00162 ! O5-glucosylgalactosyl-L-hydroxylysine
relationship: only_in_taxon NCBITaxon:9606 ! Homo sapiens