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Protein Ontology report - collagen alpha-1(VII) chain
PR:000003349 - http://purl.obolibrary.org/obo/PR_000003349
 
  Protein Forms      
Ontology Information Show OBO stanza
  PRO ID
PR:000003349   
  PRO namecollagen alpha-1(VII) chain 
  Synonyms
PRO-Short-label: EXACT:COL7A1
Other: EXACT:LC collagen | long-chain collagen
  Definition"A collagen alpha chain that is a translation product of the human COL7A1 gene or a 1:1 ortholog thereof." [PRO:CNA] 
  PRO Categorygene 
  ParentPR:000003262 collagen alpha chain
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene1                                                  Organism-Gene 2                                        
         Sequence1                                                  Organism-Sequence 2                                        
         Modification2                                                  Organism-Modification 14                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Protein Forms Switch to Compact View   

Category  
PRO ID
Name
Short Name
Definition
Ann. Has Annotation?

comp. In Complex?
gene


PR:000003349
collagen alpha-1(VII) chain
COL7A1
"A collagen alpha chain that is a translation product of the human COL7A1 gene or a 1:1 ortholog thereof." [PRO:CNA]

organism-gene


PR:Q02388
collagen alpha-1(VII) chain (human)
hCOL7A1
"A collagen alpha-1(VII) chain that is encoded in the genome of human." [PRO:CNA, UniProtKB:Q02388]

organism-sequence


PR:Q02388-1
collagen alpha-1(VII) chain isoform 1 (human)
hCOL7A1/iso:1
"A collagen alpha-1(VII) chain isoform 1 that is encoded in the genome of human." [PRO:CNA]

organism-sequence


PR:Q02388-2
collagen alpha-1(VII) chain isoform h2 (human)
hCOL7A1/iso:h2
"A collagen alpha-1(VII) chain (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q02388-2." [PRO:DNx, UniProtKB:Q02388]

organism-modification


PR:000046985
collagen alpha-1(VII) chain, signal peptide removed form (human)
hCOL7A1/SigPep-
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed. UniProtKB:Q02388, 17-2944." [PRO:DNx, Reactome:R-HSA-1650317, Reactome:R-HSA-2127487, Reactome:R-HSA-5689788, Reactome:R-HSA-5689790]

organism-modification


PR:000046987
collagen alpha-1(VII) chain, signal peptide removed 4-hydroxy-proline form (human)
hCOL7A1/SigPep-/4HyPro+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least one 4-hydroxy-proline. UniProtKB:Q02388, 17-2944, MOD:00039." [PRO:DNx, Reactome:R-HSA-2022134, Reactome:R-HSA-2127530, Reactome:R-HSA-5689756, Reactome:R-HSA-5689758]

organism-modification


PR:000046986
collagen alpha-1(VII) chain, signal peptide removed 3-hydroxy-proline and 4-hydroxy-proline form (human)
hCOL7A1/SigPep-/3hP4hP+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least one 3-hydroxy-proline and at least one 4-hydroxy-proline. UniProtKB:Q02388, 17-2944, MOD:00038|MOD:00039." [PRO:DNx, Reactome:R-HSA-2022511, Reactome:R-HSA-2127485, Reactome:R-HSA-5689740, Reactome:R-HSA-5689741]

organism-modification


PR:000046989
collagen alpha-1(VII) chain, signal peptide removed 5-hydroxy-lysine, 3-hydroxy-proline and 4-hydroxy-proline form (human)
hCOL7A1/SigPep-/5hL3hP4hP+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine, at least one 3-hydroxy-proline and at least one 4-hydroxy-proline. UniProtKB:Q02388, 17-2944, MOD:00037|MOD:00038|MOD:00039." [PRO:DNx, Reactome:R-HSA-2022952, Reactome:R-HSA-2127525, Reactome:R-HSA-5689735, Reactome:R-HSA-5689737]

organism-modification


PR:000046990
collagen alpha-1(VII) chain, signal peptide removed 5-hydroxy-lysine and 4-hydroxy-proline form (human)
hCOL7A1/SigPep-/5hL4hP+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine and at least one 4-hydroxy-proline. UniProtKB:Q02388, 17-2944, MOD:00037|MOD:00039." [PRO:DNx, Reactome:R-HSA-2022980, Reactome:R-HSA-2127496, Reactome:R-HSA-5689752, Reactome:R-HSA-5689753]

organism-modification


PR:000046989
collagen alpha-1(VII) chain, signal peptide removed 5-hydroxy-lysine, 3-hydroxy-proline and 4-hydroxy-proline form (human)
hCOL7A1/SigPep-/5hL3hP4hP+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine, at least one 3-hydroxy-proline and at least one 4-hydroxy-proline. UniProtKB:Q02388, 17-2944, MOD:00037|MOD:00038|MOD:00039." [PRO:DNx, Reactome:R-HSA-2022952, Reactome:R-HSA-2127525, Reactome:R-HSA-5689735, Reactome:R-HSA-5689737]

organism-modification


PR:000046988
collagen alpha-1(VII) chain, signal peptide removed 5-hydroxy-lysine form (human)
hCOL7A1/SigPep-/5HyLys+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine. UniProtKB:Q02388, 17-2944, MOD:00037." [PRO:DNx, Reactome:R-HSA-2023005, Reactome:R-HSA-2127521, Reactome:R-HSA-5689768, Reactome:R-HSA-5689769]

organism-modification


PR:000046990
collagen alpha-1(VII) chain, signal peptide removed 5-hydroxy-lysine and 4-hydroxy-proline form (human)
hCOL7A1/SigPep-/5hL4hP+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine and at least one 4-hydroxy-proline. UniProtKB:Q02388, 17-2944, MOD:00037|MOD:00039." [PRO:DNx, Reactome:R-HSA-2022980, Reactome:R-HSA-2127496, Reactome:R-HSA-5689752, Reactome:R-HSA-5689753]

organism-modification


PR:000046989
collagen alpha-1(VII) chain, signal peptide removed 5-hydroxy-lysine, 3-hydroxy-proline and 4-hydroxy-proline form (human)
hCOL7A1/SigPep-/5hL3hP4hP+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine, at least one 3-hydroxy-proline and at least one 4-hydroxy-proline. UniProtKB:Q02388, 17-2944, MOD:00037|MOD:00038|MOD:00039." [PRO:DNx, Reactome:R-HSA-2022952, Reactome:R-HSA-2127525, Reactome:R-HSA-5689735, Reactome:R-HSA-5689737]

organism-modification


PR:000046986
collagen alpha-1(VII) chain, signal peptide removed 3-hydroxy-proline and 4-hydroxy-proline form (human)
hCOL7A1/SigPep-/3hP4hP+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least one 3-hydroxy-proline and at least one 4-hydroxy-proline. UniProtKB:Q02388, 17-2944, MOD:00038|MOD:00039." [PRO:DNx, Reactome:R-HSA-2022511, Reactome:R-HSA-2127485, Reactome:R-HSA-5689740, Reactome:R-HSA-5689741]

organism-modification


PR:000046989
collagen alpha-1(VII) chain, signal peptide removed 5-hydroxy-lysine, 3-hydroxy-proline and 4-hydroxy-proline form (human)
hCOL7A1/SigPep-/5hL3hP4hP+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine, at least one 3-hydroxy-proline and at least one 4-hydroxy-proline. UniProtKB:Q02388, 17-2944, MOD:00037|MOD:00038|MOD:00039." [PRO:DNx, Reactome:R-HSA-2022952, Reactome:R-HSA-2127525, Reactome:R-HSA-5689735, Reactome:R-HSA-5689737]

organism-modification


PR:000046987
collagen alpha-1(VII) chain, signal peptide removed 4-hydroxy-proline form (human)
hCOL7A1/SigPep-/4HyPro+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least one 4-hydroxy-proline. UniProtKB:Q02388, 17-2944, MOD:00039." [PRO:DNx, Reactome:R-HSA-2022134, Reactome:R-HSA-2127530, Reactome:R-HSA-5689756, Reactome:R-HSA-5689758]

organism-modification


PR:000046986
collagen alpha-1(VII) chain, signal peptide removed 3-hydroxy-proline and 4-hydroxy-proline form (human)
hCOL7A1/SigPep-/3hP4hP+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least one 3-hydroxy-proline and at least one 4-hydroxy-proline. UniProtKB:Q02388, 17-2944, MOD:00038|MOD:00039." [PRO:DNx, Reactome:R-HSA-2022511, Reactome:R-HSA-2127485, Reactome:R-HSA-5689740, Reactome:R-HSA-5689741]

organism-modification


PR:000046989
collagen alpha-1(VII) chain, signal peptide removed 5-hydroxy-lysine, 3-hydroxy-proline and 4-hydroxy-proline form (human)
hCOL7A1/SigPep-/5hL3hP4hP+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine, at least one 3-hydroxy-proline and at least one 4-hydroxy-proline. UniProtKB:Q02388, 17-2944, MOD:00037|MOD:00038|MOD:00039." [PRO:DNx, Reactome:R-HSA-2022952, Reactome:R-HSA-2127525, Reactome:R-HSA-5689735, Reactome:R-HSA-5689737]

organism-modification


PR:000046990
collagen alpha-1(VII) chain, signal peptide removed 5-hydroxy-lysine and 4-hydroxy-proline form (human)
hCOL7A1/SigPep-/5hL4hP+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine and at least one 4-hydroxy-proline. UniProtKB:Q02388, 17-2944, MOD:00037|MOD:00039." [PRO:DNx, Reactome:R-HSA-2022980, Reactome:R-HSA-2127496, Reactome:R-HSA-5689752, Reactome:R-HSA-5689753]

organism-modification


PR:000046989
collagen alpha-1(VII) chain, signal peptide removed 5-hydroxy-lysine, 3-hydroxy-proline and 4-hydroxy-proline form (human)
hCOL7A1/SigPep-/5hL3hP4hP+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine, at least one 3-hydroxy-proline and at least one 4-hydroxy-proline. UniProtKB:Q02388, 17-2944, MOD:00037|MOD:00038|MOD:00039." [PRO:DNx, Reactome:R-HSA-2022952, Reactome:R-HSA-2127525, Reactome:R-HSA-5689735, Reactome:R-HSA-5689737]

organism-modification


PR:000046988
collagen alpha-1(VII) chain, signal peptide removed 5-hydroxy-lysine form (human)
hCOL7A1/SigPep-/5HyLys+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine. UniProtKB:Q02388, 17-2944, MOD:00037." [PRO:DNx, Reactome:R-HSA-2023005, Reactome:R-HSA-2127521, Reactome:R-HSA-5689768, Reactome:R-HSA-5689769]

organism-modification


PR:000046990
collagen alpha-1(VII) chain, signal peptide removed 5-hydroxy-lysine and 4-hydroxy-proline form (human)
hCOL7A1/SigPep-/5hL4hP+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine and at least one 4-hydroxy-proline. UniProtKB:Q02388, 17-2944, MOD:00037|MOD:00039." [PRO:DNx, Reactome:R-HSA-2022980, Reactome:R-HSA-2127496, Reactome:R-HSA-5689752, Reactome:R-HSA-5689753]

organism-modification


PR:000046989
collagen alpha-1(VII) chain, signal peptide removed 5-hydroxy-lysine, 3-hydroxy-proline and 4-hydroxy-proline form (human)
hCOL7A1/SigPep-/5hL3hP4hP+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine, at least one 3-hydroxy-proline and at least one 4-hydroxy-proline. UniProtKB:Q02388, 17-2944, MOD:00037|MOD:00038|MOD:00039." [PRO:DNx, Reactome:R-HSA-2022952, Reactome:R-HSA-2127525, Reactome:R-HSA-5689735, Reactome:R-HSA-5689737]

organism-modification


PR:000046989
collagen alpha-1(VII) chain, signal peptide removed 5-hydroxy-lysine, 3-hydroxy-proline and 4-hydroxy-proline form (human)
hCOL7A1/SigPep-/5hL3hP4hP+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine, at least one 3-hydroxy-proline and at least one 4-hydroxy-proline. UniProtKB:Q02388, 17-2944, MOD:00037|MOD:00038|MOD:00039." [PRO:DNx, Reactome:R-HSA-2022952, Reactome:R-HSA-2127525, Reactome:R-HSA-5689735, Reactome:R-HSA-5689737]

organism-modification


PR:000046990
collagen alpha-1(VII) chain, signal peptide removed 5-hydroxy-lysine and 4-hydroxy-proline form (human)
hCOL7A1/SigPep-/5hL4hP+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine and at least one 4-hydroxy-proline. UniProtKB:Q02388, 17-2944, MOD:00037|MOD:00039." [PRO:DNx, Reactome:R-HSA-2022980, Reactome:R-HSA-2127496, Reactome:R-HSA-5689752, Reactome:R-HSA-5689753]

organism-modification


PR:000046989
collagen alpha-1(VII) chain, signal peptide removed 5-hydroxy-lysine, 3-hydroxy-proline and 4-hydroxy-proline form (human)
hCOL7A1/SigPep-/5hL3hP4hP+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine, at least one 3-hydroxy-proline and at least one 4-hydroxy-proline. UniProtKB:Q02388, 17-2944, MOD:00037|MOD:00038|MOD:00039." [PRO:DNx, Reactome:R-HSA-2022952, Reactome:R-HSA-2127525, Reactome:R-HSA-5689735, Reactome:R-HSA-5689737]

organism-modification


PR:000060781
collagen alpha-1(VII) chain, signal peptide removed glucosylgalactosylhydroxylysine form (human)
hCOL7A1/SigPep-/GlcGalHyLys+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least 1 glucosylgalactosylhydroxylated lysine. Example: UniProtKB:Q02388-1, 17-2944, MOD:00162." [PRO:DNx, Reactome:R-HSA-2023594, Reactome:R-HSA-2127478, Reactome:R-HSA-5689818, Reactome:R-HSA-5689819]

organism-modification


PR:000061665
collagen alpha-1(VII) chain, signal peptide removed 3-hydroxy-proline, 4-hydroxy-proline, and galactosylhydroxylysine form (human)
hCOL7A1/SigPep-/3HyPro4HyPro(3+)GalHyLys+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least 1 3-hydroxy-proline, at least 1 galactosylhydroxylated lysine, and at least 3 4-hydroxy-prolines. Example: UniProtKB:Q02388-1, 17-2944, MOD:00038|MOD:00039(3+)|MOD:01914." [PRO:DNx, Reactome:R-HSA-2023565, Reactome:R-HSA-2127539, Reactome:R-HSA-5689743, Reactome:R-HSA-5689746]

organism-modification


PR:000062148
collagen alpha-1(VII) chain, signal peptide removed 3-hydroxy-proline, 4-hydroxy-proline, and glucosylgalactosylhydroxylysine form (human)
hCOL7A1/SigPep-/3HyPro4HyPro(3+)GlcGalHyLys+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least 1 3-hydroxy-proline, at least 1 glucosylgalactosylhydroxylated lysine, and at least 3 4-hydroxy-prolines. Example: UniProtKB:Q02388-1, 17-2944, MOD:00038|MOD:00039(3+)|MOD:00162." [PRO:DNx, Reactome:R-HSA-2023670, Reactome:R-HSA-2127471, Reactome:R-HSA-5689748, Reactome:R-HSA-5689750]

organism-modification


PR:000062598
collagen alpha-1(VII) chain, signal peptide removed galactosylhydroxylysine form (human)
hCOL7A1/SigPep-/GalHyLys+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least 1 galactosylhydroxylated lysine. Example: UniProtKB:Q02388-1, 17-2944, MOD:01914." [PRO:DNx, Reactome:R-HSA-2023540, Reactome:R-HSA-2127517, Reactome:R-HSA-5689813, Reactome:R-HSA-5689816]

organism-modification


PR:000063629
collagen alpha-1(VII) chain, signal peptide removed 4-hydroxy-proline and glucosylgalactosylhydroxylysine form (human)
hCOL7A1/SigPep-/4HyPro(3+)GlcGalHyLys+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least 1 glucosylgalactosylhydroxylated lysine and at least 3 4-hydroxy-prolines. Example: UniProtKB:Q02388-1, 17-2944, MOD:00039(3+)|MOD:00162." [PRO:DNx, Reactome:R-HSA-2023634, Reactome:R-HSA-2127507, Reactome:R-HSA-5689764, Reactome:R-HSA-5689766]

organism-modification


PR:000064092
collagen alpha-1(VII) chain, signal peptide removed 4-hydroxy-proline and galactosylhydroxylysine form (human)
hCOL7A1/SigPep-/4HyPro(3+)GalHyLys+
"A collagen alpha-1(VII) chain (human) that has had the signal peptide removed and that includes at least 1 galactosylhydroxylated lysine and at least 3 4-hydroxy-prolines. Example: UniProtKB:Q02388-1, 17-2944, MOD:00039(3+)|MOD:01914." [PRO:DNx, Reactome:R-HSA-2023557, Reactome:R-HSA-2127473, Reactome:R-HSA-5689759, Reactome:R-HSA-5689761]

organism-modification


PR:000067012
collagen alpha-1(VII) chain deaminated 1 (human)
hCOL7A1/Deam:1
"A collagen alpha-1(VII) chain (human) that has been deaminated on the residue at the position equivalent to Asn-337 of the amino acid sequence represented by UniProtKB:Q02388-1. Example: UniProtKB:Q02388-1, Asn-337, MOD:00684." [IEDB_epitope:1982494, PRO:DNx]

organism-modification


PR:000085431
collagen alpha-1(VII) chain phosphorylated 1 (human)
hCOL7A1/Phos:1
"A collagen alpha-1(VII) chain (human) that has been phosphorylated on the residue at the position equivalent to Thr-1280 of the amino acid sequence represented by UniProtKB:Q02388-1. Example: UniProtKB:Q02388-1, Thr-1280, MOD:00047." [IEDB_epitope:2147775, PRO:DNx]

organism-gene


PR:Q63870
collagen alpha-1(VII) chain (mouse)
mCOL7A1
"A collagen alpha-1(VII) chain that is encoded in the genome of mouse." [OMA:Q63870, PRO:DNx]

sequence


PR:000003350
collagen alpha-1(VII) chain isoform 1
COL7A1/iso:1
"A collagen alpha-1(VII) chain that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q02388-1 or a 1:1 ortholog thereof." [PRO:CNA]

organism-sequence


PR:Q02388-1
collagen alpha-1(VII) chain isoform 1 (human)
hCOL7A1/iso:1
"A collagen alpha-1(VII) chain isoform 1 that is encoded in the genome of human." [PRO:CNA]

modification


PR:000003352
collagen alpha-1(VII) chain isoform 1, signal peptide removed form
COL7A1/iso:1/SigPep-
"A collagen alpha-1(VII) chain isoform 1 that has had the signal peptide removed to yield the mature protein. Example: UniProtKB:Q02388-1, 17-2944." [PRO:CNA]

modification


PR:000025421
collagen alpha-1(VII) chain proteolytic cleavage product
COL7A1/ClvPrd
"A collagen alpha-1(VII) chain that has been processed by proteolytic cleavage." [PRO:DNx]