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Protein Ontology report - cochlin
PR:000005683 - http://purl.obolibrary.org/obo/PR_000005683
 
  Protein Forms  Annotations      
Ontology Information Show OBO stanza
  PRO ID
PR:000005683   
  PRO namecochlin 
  Synonyms
PRO-Short-label: EXACT:COCH
Gene-based: RELATED:COCH5B2 | UNQ257/PRO294
Other: EXACT:COCH-5B2
  Definition"A protein that is a translation product of the human COCH gene or a 1:1 ortholog thereof." [PRO:DNx] 
  PRO Categorygene 
  ParentPR:000000001 protein
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene1                                                  Organism-Gene 3                                        
         Sequence0                                                  Organism-Sequence 2                                        
         Modification1                                                  Organism-Modification 11                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Protein Forms  Switch to Extended View   

Category  
PRO Form Name
Short Name
Ann. Has Annotation?

comp. In Complex?
gene


PR:000005683 cochlin
COCH

organism-gene


PR:O42163 cochlin (chicken)
chick-COCH

organism-gene


PR:O43405 cochlin (human)
hCOCH

organism-sequence


PR:O43405-1 cochlin isoform h1 (human)
hCOCH/iso:h1

organism-sequence


PR:O43405-2 cochlin isoform h2 (human)
hCOCH/iso:h2

organism-modification


PR:000069954 cochlin deaminated 1 (human)
hCOCH/Deam:1

organism-modification


PR:000070549 cochlin methylated 1 (human)
hCOCH/Me:1

organism-modification


PR:000072750 cochlin cysteinylated 1 (human)
hCOCH/Cyst:1

organism-modification


PR:000072901 cochlin methylated 2 (human)
hCOCH/Me:2

organism-modification


PR:000073704 cochlin deaminated 2 (human)
hCOCH/Deam:2

organism-gene


PR:Q62507 cochlin (mouse)
mCOCH

organism-modification


PR:000037260 cochlin, signal peptide removed form (mouse)
mCOCH/SigPep-
Yes
organism-modification


PR:000037261 cochlin p8 (mouse)
mCOCH/Clv:p8
Yes
organism-modification


PR:000037263 cochlin p40 (mouse)
mCOCH/Clv:p40
Yes
organism-modification


PR:000037264 cochlin, signal peptide removed glycosylated form (mouse)
mCOCH/SigPep-/GlycoRes+

organism-modification


PR:000037262 cochlin p18 (mouse)
mCOCH/Clv:p18
Yes
organism-modification


PR:000037265 cochlin precursor (mouse)
mCOCH/precursor

union


PR:000037266 cochlin N-terminal fragment (mouse)
mCOCH/Nter
Yes
organism-modification


PR:000037261 cochlin p8 (mouse)
mCOCH/Clv:p8

organism-modification


PR:000037262 cochlin p18 (mouse)
mCOCH/Clv:p18

modification


PR:000037270 cochlin proteolytic cleavage product
COCH/ClvPrd

organism-modification


PR:000037261 cochlin p8 (mouse)
mCOCH/Clv:p8
Yes
organism-modification


PR:000037262 cochlin p18 (mouse)
mCOCH/Clv:p18
Yes
organism-modification


PR:000037263 cochlin p40 (mouse)
mCOCH/Clv:p40
Yes
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Functional Annotation (PRO-centric view) Switch to GO Centric View   
PRO Term GO Annotation Evidence
PR:000037260 mCOCH/SigPep-
UniProtKB:Q62507, 27-552		 located_inGO:0031012 extracellular matrix MGI_ref:5525040; PMID:23684986
PR:000037261 mCOCH/Clv:p8
UniProtKB:Q62507, 26-134		 located_inGO:0005576 extracellular region MGI_ref:5525040; PMID:23684986
PR:000037262 mCOCH/Clv:p18
UniProtKB:Q62507, 26-134, MOD:00693		 located_inGO:0005576 extracellular region MGI_ref:5525040; PMID:23684986
PR:000037263 mCOCH/Clv:p40
UniProtKB:Q62507, 135-552		 located_inGO:0031012 extracellular matrix MGI_ref:5525040; PMID:23684986
PR:000037266 mCOCH/Nter
The fragment may or may not be glycosylated		 acts_upstream_of_or_withinGO:0042742 defense response to bacterium MGI_ref:5525040; PMID:23684986
GO:0045089 positive regulation of innate immune response MGI_ref:5525040; PMID:23684986