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Protein Ontology report - stromal cell-derived factor 1
PR:000006066 - http://purl.obolibrary.org/obo/PR_000006066
 
  Protein Forms      
Ontology Information Show OBO stanza
  PRO ID
PR:000006066   
  PRO namestromal cell-derived factor 1 
  Synonyms
PRO-Short-label: EXACT:CXCL12
Gene-based: RELATED:SDF1 | SDF1A | SDF1B
Other: EXACT:12-O-tetradecanoylphorbol 13-acetate repressed protein 1 | C-X-C motif chemokine 12 | intercrine reduced in hepatomas | IRH | PBSF | pre-B cell growth-stimulating factor | SDF-1 | thymic lymphoma cell-stimulating factor | TLSF | TPAR1
  Definition"A protein that is a translation product of the human CXCL12 gene or a 1:1 ortholog thereof." [PRO:DNx] 
  PRO Categorygene 
  ParentPR:000000001 protein
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene1                                                  Organism-Gene 2                                        
         Sequence1                                                  Organism-Sequence 9                                        
         Modification1                                                  Organism-Modification 1                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Protein Forms Switch to Compact View   

Category  

PRO ID

Name

Short Name

Definition

Ann. Has Annotation?

comp. In Complex?
gene



PR:000006066

stromal cell-derived factor 1

CXCL12


"A protein that is a translation product of the human CXCL12 gene or a 1:1 ortholog thereof." [PRO:DNx]


organism-gene



PR:P40224

stromal cell-derived factor 1 (mouse)

mCXCL12


"A stromal cell-derived factor 1 that is encoded in the genome of mouse." [OMA:P40224, PRO:DNx]


organism-sequence



PR:P40224-1

stromal cell-derived factor 1 isoform Alpha (mouse)

mCXCL12/iso:Alpha


"A stromal cell-derived factor 1 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P40224-1." [PRO:DNx, UniProtKB:P40224]


organism-sequence



PR:P40224-2

stromal cell-derived factor 1 isoform Beta (mouse)

mCXCL12/iso:Beta


"A stromal cell-derived factor 1 isoform Beta that is encoded in the genome of mouse." [PRO:DNx]


organism-gene



PR:P48061

stromal cell-derived factor 1 (human)

hCXCL12


"A stromal cell-derived factor 1 that is encoded in the genome of human." [PRO:DNx, UniProtKB:P48061]


organism-sequence



PR:P48061-1

stromal cell-derived factor 1 isoform Beta (human)

hCXCL12/iso:Beta


"A stromal cell-derived factor 1 isoform Beta that is encoded in the genome of human." [PRO:DNx]


organism-sequence



PR:P48061-2

stromal cell-derived factor 1 isoform Alpha (human)

hCXCL12/iso:Alpha


"A stromal cell-derived factor 1 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P48061-2." [PRO:DNx, UniProtKB:P48061]


organism-sequence



PR:P48061-3

stromal cell-derived factor 1 isoform Gamma (human)

hCXCL12/iso:Gamma


"A stromal cell-derived factor 1 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P48061-3." [PRO:DNx, UniProtKB:P48061]


organism-sequence



PR:P48061-4

stromal cell-derived factor 1 isoform Delta (human)

hCXCL12/iso:Delta


"A stromal cell-derived factor 1 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P48061-4." [PRO:DNx, UniProtKB:P48061]


organism-sequence



PR:P48061-5

stromal cell-derived factor 1 isoform Epsilon (human)

hCXCL12/iso:Epsilon


"A stromal cell-derived factor 1 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P48061-5." [PRO:DNx, UniProtKB:P48061]


organism-sequence



PR:P48061-6

stromal cell-derived factor 1 isoform Theta (human)

hCXCL12/iso:Theta


"A stromal cell-derived factor 1 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P48061-6." [PRO:DNx, UniProtKB:P48061]


organism-sequence



PR:P48061-7

stromal cell-derived factor 1 isoform h7 (human)

hCXCL12/iso:h7


"A stromal cell-derived factor 1 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P48061-7." [PRO:DNx, UniProtKB:P48061]


organism-modification



PR:000047109

stromal cell-derived factor 1, signal peptide removed form (human)

hCXCL12/SigPep-


"A stromal cell-derived factor 1 (human) that has had the signal peptide removed. UniProtKB:P48061, 22-93." [PRO:DNx, Reactome:R-HSA-2980693]


sequence



PR:000039530

stromal cell-derived factor 1 isoform Beta

CXCL12/iso:Beta


"A stromal cell-derived factor 1 that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P48061-1 or a 1:1 ortholog thereof." [PRO:DNx]


organism-sequence



PR:P40224-2

stromal cell-derived factor 1 isoform Beta (mouse)

mCXCL12/iso:Beta


"A stromal cell-derived factor 1 isoform Beta that is encoded in the genome of mouse." [PRO:DNx]


organism-sequence



PR:P48061-1

stromal cell-derived factor 1 isoform Beta (human)

hCXCL12/iso:Beta


"A stromal cell-derived factor 1 isoform Beta that is encoded in the genome of human." [PRO:DNx]


modification



PR:000019591

stromal cell-derived factor 1 proteolytic cleavage product

CXCL12/ClvPrd


"A stromal cell-derived factor 1 that has been processed by proteolytic cleavage." [PRO:DNx]