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Protein Ontology report - transcription factor RFX4
PR:000013926 - http://purl.obolibrary.org/obo/PR_000013926
 
  Protein Forms  Annotations      
Ontology Information Show OBO stanza
  PRO ID
PR:000013926   
  PRO nametranscription factor RFX4 
  Synonyms
PRO-Short-label: EXACT:RFX4
Other: EXACT:regulatory factor X 4 | testis development protein NYD-SP10
  Definition"A protein that is a translation product of the human RFX4 gene or a 1:1 ortholog thereof." [PRO:DNx] 
  PRO Categorygene 
  ParentPR:000000001 protein
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene1                                                  Organism-Gene 3                                        
         Sequence2                                                  Organism-Sequence 8                                        
         Modification0                                                  Organism-Modification 0                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Protein Forms  Switch to Extended View   

Category  
PRO Form Name
Short Name
Ann. Has Annotation?

comp. In Complex?
gene


PR:000013926 transcription factor RFX4
RFX4

organism-gene


PR:A2BGA0 transcription factor RFX4 (zebrafish)
z-RFX4

organism-gene


PR:Q33E94 transcription factor RFX4 (human)
hRFX4

organism-sequence


PR:Q33E94-1 transcription factor RFX4 isoform 1 (human)
hRFX4/iso:1

organism-sequence


PR:Q33E94-2 transcription factor RFX4 isoform h2 (human)
hRFX4/iso:h2

organism-sequence


PR:Q33E94-3 transcription factor RFX4 isoform 3 (human)
hRFX4/iso:3

organism-sequence


PR:Q33E94-4 transcription factor RFX4 isoform h4 (human)
hRFX4/iso:h4

organism-gene


PR:Q7TNK1 transcription factor RFX4 (mouse)
mRFX4

organism-sequence


PR:Q7TNK1-1 transcription factor RFX4 isoform 1 (mouse)
mRFX4/iso:1
Yes
organism-sequence


PR:Q7TNK1-2 transcription factor RFX4 isoform 2 (mouse)
mRFX4/iso:2

organism-sequence


PR:Q7TNK1-3 transcription factor RFX4 isoform m3 (mouse)
mRFX4/iso:m3

organism-sequence


PR:Q7TNK1-4 transcription factor RFX4 isoform m4 (mouse)
mRFX4/iso:m4

sequence


PR:000040781 transcription factor RFX4 isoform 1
RFX4/iso:1

organism-sequence


PR:Q33E94-1 transcription factor RFX4 isoform 1 (human)
hRFX4/iso:1

organism-sequence


PR:Q7TNK1-1 transcription factor RFX4 isoform 1 (mouse)
mRFX4/iso:1
Yes
sequence


PR:000040782 transcription factor RFX4 isoform 3
RFX4/iso:3

organism-sequence


PR:Q33E94-3 transcription factor RFX4 isoform 3 (human)
hRFX4/iso:3

organism-sequence


PR:Q7TNK1-2 transcription factor RFX4 isoform 2 (mouse)
mRFX4/iso:2

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Functional Annotation (GO-centric view) Switch to PRO Centric View     

Biological Process GO Term
Protein Forms & Complexes
Evidence
GO:0021516 dorsal spinal cord developmentPR:Q7TNK1-1 mRFX4/iso:1 MGI_ref:2669568; PMID:12925582
GO:0021696 cerebellar cortex morphogenesisPR:Q7TNK1-1 mRFX4/iso:1 MGI_ref:2669568; PMID:12925582
GO:0030900 forebrain developmentPR:Q7TNK1-1 mRFX4/iso:1 MGI_ref:2669568; PMID:12925582
GO:0030901 midbrain developmentPR:Q7TNK1-1 mRFX4/iso:1 MGI_ref:2669568; PMID:12925582
GO:0045944 positive regulation of transcription by RNA polymerase IIPR:Q7TNK1-1 mRFX4/iso:1 MGI_ref:3701709; PMID:16893423

Molecular Function GO Term
Protein Forms & Complexes
Evidence
GO:0003682 chromatin bindingPR:Q7TNK1-1 mRFX4/iso:1 MGI_ref:3701709; PMID:16893423

Cellular Location GO Term
Protein Forms & Complexes
Evidence
GO:0005634 nucleusPR:Q7TNK1-1 mRFX4/iso:1 MGI_ref:3701709; PMID:16893423