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Protein Ontology report - pre-mRNA-splicing factor SYF1
PR:000017470 - http://purl.obolibrary.org/obo/PR_000017470
 
  Protein Forms      
Ontology Information Show OBO stanza
  PRO ID
PR:000017470   
  PRO namepre-mRNA-splicing factor SYF1 
  Synonyms
PRO-Short-label: EXACT:XAB2
Gene-based: RELATED:HCNP | KIAA1177 | PP3898 | SYF1
Other: EXACT:protein HCNP | XPA-binding protein 2
  Definition"A protein that is a translation product of the human XAB2 gene or a 1:1 ortholog thereof." [PRO:DNx] 
  PRO Categorygene 
  ParentPR:000000001 protein
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene1                                                  Organism-Gene 7                                        
         Sequence1                                                  Organism-Sequence 3                                        
         Modification0                                                  Organism-Modification 5                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Protein Forms Switch to Compact View   

Category  

PRO ID

Name

Short Name

Definition

Ann. Has Annotation?

comp. In Complex?
gene



PR:000017470

pre-mRNA-splicing factor SYF1

XAB2


"A protein that is a translation product of the human XAB2 gene or a 1:1 ortholog thereof." [PRO:DNx]


organism-gene



PR:A1Z9G2

pre-mRNA-splicing factor syf1 homolog (fruit fly)

fly-XAB2


"A pre-mRNA-splicing factor SYF1 that is encoded in the genome of fruit fly." [OMA:A1Z9G2, PRO:DNx]


organism-gene



PR:Q04048

pre-mRNA-splicing factor SYF1 (yeast)

yXAB2


"A pre-mRNA-splicing factor SYF1 that is encoded in the genome of yeast." [OMA:Q04048, PRO:DNx]


organism-gene



PR:Q54Z08

pre-mRNA-splicing factor SYF1 (Dictyostelium discoideum)

Dicty-XAB2


"A pre-mRNA-splicing factor SYF1 that is encoded in the genome of Dictyostelium discoideum." [OMA:Q54Z08, PRO:DNx]


organism-gene



PR:Q99PK0

pre-mRNA-splicing factor SYF1 (rat)

rXAB2


"A pre-mRNA-splicing factor SYF1 that is encoded in the genome of rat." [OMA:Q99PK0, PRO:DNx]


organism-sequence



PR:Q99PK0-1

pre-mRNA-splicing factor SYF1 isoform 1 (rat)

rXAB2/iso:1


"A pre-mRNA-splicing factor SYF1 isoform 1 that is encoded in the genome of rat." [PRO:DNx]


organism-gene



PR:Q9DCD2

pre-mRNA-splicing factor SYF1 (mouse)

mXAB2


"A pre-mRNA-splicing factor SYF1 that is encoded in the genome of mouse." [OMA:Q9DCD2, PRO:DNx]


organism-sequence



PR:Q9DCD2-1

pre-mRNA-splicing factor SYF1 isoform 1 (mouse)

mXAB2/iso:1


"A pre-mRNA-splicing factor SYF1 isoform 1 that is encoded in the genome of mouse." [PRO:DNx]


organism-modification



PR:000066086

pre-mRNA-splicing factor SYF1 cysteinylated 1 (mouse)

mXAB2/Cyst:1


"A pre-mRNA-splicing factor SYF1 (mouse) that has been cysteinylated on the residue at the position equivalent to Cys-691 of the amino acid sequence represented by UniProtKB:Q9DCD2. UniProtKB:Q9DCD2, Cys-691, MOD:00765." [IEDB_epitope:2087764, PRO:DNx]


organism-gene



PR:Q9HCS7

pre-mRNA-splicing factor SYF1 (human)

hXAB2


"A pre-mRNA-splicing factor SYF1 that is encoded in the genome of human." [PRO:CNx, UniProtKB:Q9HCS7]


organism-sequence



PR:Q9HCS7-1

pre-mRNA-splicing factor SYF1 isoform 1 (human)

hXAB2/iso:1


"A pre-mRNA-splicing factor SYF1 isoform 1 that is encoded in the genome of human." [PRO:DNx]


organism-modification



PR:000067043

pre-mRNA-splicing factor SYF1 deaminated 1 (human)

hXAB2/Deam:1


"A pre-mRNA-splicing factor SYF1 (human) that has been deaminated on the residue at the position equivalent to Gln-477 of the amino acid sequence represented by UniProtKB:Q9HCS7. UniProtKB:Q9HCS7, Gln-477, MOD:00685." [IEDB_epitope:1978083, PRO:DNx]


organism-modification



PR:000073171

pre-mRNA-splicing factor SYF1 methylated 1 (human)

hXAB2/Me:1


"A pre-mRNA-splicing factor SYF1 (human) that has been methylated on the residue at the position equivalent to Cys-668 of the amino acid sequence represented by UniProtKB:Q9HCS7. UniProtKB:Q9HCS7, Cys-668, MOD:00660." [IEDB_epitope:1004787, IEDB_epitope:1007864, PRO:DNx]


organism-modification



PR:000076272

pre-mRNA-splicing factor SYF1 cysteinylated 1 (human)

hXAB2/Cyst:1


"A pre-mRNA-splicing factor SYF1 (human) that has been cysteinylated on the residue at the position equivalent to Cys-37 of the amino acid sequence represented by UniProtKB:Q9HCS7. UniProtKB:Q9HCS7, Cys-37, MOD:00765." [IEDB_epitope:1023204, PRO:DNx]


organism-modification



PR:000084689

pre-mRNA-splicing factor SYF1 deaminated 2 (human)

hXAB2/Deam:2


"A pre-mRNA-splicing factor SYF1 (human) that has been deaminated on the residue at the position equivalent to Asn-448 of the amino acid sequence represented by UniProtKB:Q9HCS7. UniProtKB:Q9HCS7, Asn-448, MOD:00684." [IEDB_epitope:1583248, PRO:DNx]


organism-gene



PR:Q9P7R9

pre-mRNA-splicing factor cwf3 (Schizosaccharomyces pombe 972h-)

Spom972h-XAB2


"A pre-mRNA-splicing factor SYF1 that is encoded in the genome of Schizosaccharomyces pombe 972h-." [OMA:Q9P7R9, PRO:DNx]


sequence



PR:000043401

pre-mRNA-splicing factor SYF1 isoform 1

XAB2/iso:1


"A pre-mRNA-splicing factor SYF1 that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9HCS7-1 or a 1:1 ortholog thereof." [PRO:DNx]


organism-sequence



PR:Q99PK0-1

pre-mRNA-splicing factor SYF1 isoform 1 (rat)

rXAB2/iso:1


"A pre-mRNA-splicing factor SYF1 isoform 1 that is encoded in the genome of rat." [PRO:DNx]


organism-sequence



PR:Q9DCD2-1

pre-mRNA-splicing factor SYF1 isoform 1 (mouse)

mXAB2/iso:1


"A pre-mRNA-splicing factor SYF1 isoform 1 that is encoded in the genome of mouse." [PRO:DNx]


organism-sequence



PR:Q9HCS7-1

pre-mRNA-splicing factor SYF1 isoform 1 (human)

hXAB2/iso:1


"A pre-mRNA-splicing factor SYF1 isoform 1 that is encoded in the genome of human." [PRO:DNx]