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Protein Ontology report - prokaryotic-type lysine--tRNA ligase
PR:000033719 - http://purl.obolibrary.org/obo/PR_000033719
 
  Protein Forms  Annotations      
Ontology Information Show OBO stanza
  PRO ID
PR:000033719   
  PRO nameprokaryotic-type lysine--tRNA ligase 
  Synonyms
PRO-Short-label: EXACT:lysS
Other: EXACT:prokaryotic lysyl-tRNA synthetase
RELATED:asuD | herC
  Definition"A protein that is a translation product of the Escherichia coli K-12 lysS or lysU genes, 1:1 orthologs thereof, or a semi-ortholog thereof." [PRO:DAN] 
  PRO Categoryfamily 
  ParentPR:000000001 protein
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Family1                                                  Organism-Family 0                                        
         Gene1                                                  Organism-Gene 5                                        
         Sequence1                                                  Organism-Sequence 1                                        
         Modification3                                                  Organism-Modification 2                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Protein Forms Switch to Compact View   

Category  

PRO ID

Name

Short Name

Definition

Ann. Has Annotation?

comp. In Complex?
family



PR:000033719

prokaryotic-type lysine--tRNA ligase

lysS


"A protein that is a translation product of the Escherichia coli K-12 lysS or lysU genes, 1:1 orthologs thereof, or a semi-ortholog thereof." [PRO:DAN]


gene



PR:000023141

lysine--tRNA ligase, heat inducible

lysU


"A prokaryotic-type lysine--tRNA ligase that is a translation product of the Escherichia coli K-12 lysU gene or a 1:1 ortholog thereof." [PRO:DNx]


modification



PR:000024534

lysine--tRNA ligase, heat inducible, initiator methionine removed form

lysU/InitMet-


"A lysine--tRNA ligase, heat inducible that has had the initiator methionine removed." [PRO:DNx]


organism-gene



PR:A5I7P4

lysine--tRNA ligase (Clostridium botulinum A str. Hall)

KARS (CLOBH)


"A prokaryotic-type lysine--tRNA ligase that is encoded in the genome of Clostridium botulinum A str. Hall." [OMA:A5I7P4, PRO:DNx]


organism-gene



PR:P0A8N3

lysine--tRNA ligase (Escherichia coli K-12)

Ec-lysS


"A prokaryotic-type lysine--tRNA ligase that is a translation product of the lysS gene in Escherichia coli K-12." [PRO:DAN, UniProtKB:P0A8N3]


organism-gene



PR:P0A8N5

lysine--tRNA ligase, heat inducible (Escherichia coli K-12)

Ec-lysU


"A prokaryotic-type lysine--tRNA ligase that is a translation product of the lysU gene in Escherichia coli K-12." [PRO:DAN, UniProtKB:P0A8N5]


organism-gene



PR:Q2G0Q3

lysine--tRNA ligase (Staphylococcus aureus subsp. aureus NCTC 8325)

KARS (STAA8)


"A prokaryotic-type lysine--tRNA ligase that is encoded in the genome of Staphylococcus aureus subsp. aureus NCTC 8325." [OMA:Q2G0Q3, PRO:DNx]


organism-gene



PR:Q9LJE2

lysine--tRNA ligase, chloroplastic/mitochondrial (Arabidopsis thaliana)

At-OVA5


"A prokaryotic-type lysine--tRNA ligase that is encoded in the genome of Arabidopsis thaliana." [PRO:DAN]


sequence



PR:000025142

lysine--tRNA ligase, heat inducible isoform 1

lysU/iso:1


"A prokaryotic-type lysine--tRNA ligase that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P0A8N5-1 or a 1:1 ortholog thereof." [EcoCyc:LYSU-MONOMER]


organism-sequence



PR:P0A8N5-1

lysine--tRNA ligase, heat inducible isoform 1 (Escherichia coli K-12)

Ec-lysU/iso:1


"A lysine--tRNA ligase, heat inducible isoform 1 that is encoded in the genome of Escherichia coli K-12." [PRO:DNx, UniProtKB:P0A8N5]


organism-modification



PR:000036732

lysine--tRNA ligase, heat inducible isoform 1, initiator methionine removed form (Escherichia coli K-12)

Ec-lysU/iso:1/InitMet-


"A lysine--tRNA ligase, heat inducible isoform 1, initiator methionine removed form in Escherichia coli K-12. UniProtKB:P0A8N5-1, 2-505." [EcoCyc:LYSU-MONOMER, PRO:CNA]

Yes

organism-modification



PR:000036733

lysine--tRNA ligase, heat inducible isoform 1, initiator methionine removed acetylated 1 (Escherichia coli K-12)

Ec-lysU/iso:1/InitMet-/Ac:1


"A lysine--tRNA ligase, heat inducible isoform 1, initiator methionine removed acetylated 1 in Escherichia coli K-12. UniProtKB:P0A8N5-1, 2-505, Lys-114/Lys-156, MOD:00064." [EcoCyc:LYSU-MONOMER, PRO:CNA]


modification



PR:000025144

lysine--tRNA ligase, heat inducible isoform 1, initiator methionine removed form

lysU/iso:1/InitMet-


"A lysine--tRNA ligase, heat inducible isoform 1 that has had the initiator methionine removed." [PRO:CNA]


modification



PR:000025145

lysine--tRNA ligase, heat inducible isoform 1, initiator methionine removed acetylated 1

lysU/iso:1/InitMet-/Ac:1


"A lysine--tRNA ligase, heat inducible isoform 1, initiator methionine removed form that has been post-translationally modified to include N6-acetyllysine residues. Example: UniProtKB:P0A8N5-1, 2-505, Lys-114/Lys-156, MOD:00064." [EcoCyc:LYSU-MONOMER]


organism-modification



PR:000036733

lysine--tRNA ligase, heat inducible isoform 1, initiator methionine removed acetylated 1 (Escherichia coli K-12)

Ec-lysU/iso:1/InitMet-/Ac:1


"A lysine--tRNA ligase, heat inducible isoform 1, initiator methionine removed acetylated 1 in Escherichia coli K-12. UniProtKB:P0A8N5-1, 2-505, Lys-114/Lys-156, MOD:00064." [EcoCyc:LYSU-MONOMER, PRO:CNA]


organism-modification



PR:000036732

lysine--tRNA ligase, heat inducible isoform 1, initiator methionine removed form (Escherichia coli K-12)

Ec-lysU/iso:1/InitMet-


"A lysine--tRNA ligase, heat inducible isoform 1, initiator methionine removed form in Escherichia coli K-12. UniProtKB:P0A8N5-1, 2-505." [EcoCyc:LYSU-MONOMER, PRO:CNA]

Yes

organism-modification



PR:000036733

lysine--tRNA ligase, heat inducible isoform 1, initiator methionine removed acetylated 1 (Escherichia coli K-12)

Ec-lysU/iso:1/InitMet-/Ac:1


"A lysine--tRNA ligase, heat inducible isoform 1, initiator methionine removed acetylated 1 in Escherichia coli K-12. UniProtKB:P0A8N5-1, 2-505, Lys-114/Lys-156, MOD:00064." [EcoCyc:LYSU-MONOMER, PRO:CNA]


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Functional Annotation (PRO-centric view) Switch to GO Centric View   
PRO Term GO Annotation Evidence
PR:000036732 Ec-lysU/iso:1/InitMet-
UniProtKB:P0A8N5-1, 2-505
acts_upstream_of_or_withinGO:0006412 translation EcoCyc:LYSU-MONOMER
GO:0006430 lysyl-tRNA aminoacylation EcoCyc:LYSU-MONOMER
enablesGO:0000287 magnesium ion binding EcoCyc:LYSU-MONOMER
GO:0004824 lysine-tRNA ligase activity EcoCyc:LYSU-MONOMER
GO:0005524 ATP binding EcoCyc:LYSU-MONOMER