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RACE-PRO
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Documentation
Protein Ontology report - melanopsin isoform 1
PR:000035677 -
http://purl.obolibrary.org/obo/PR_000035677
Protein Forms
Annotations
Ontology Information
Show OBO stanza
PRO ID
PR:000035677
PRO name
melanopsin isoform 1
Synonyms
PRO-Short-label
:
EXACT:
OPN4/iso:1
Definition
"A melanopsin that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by
UniProtKB:Q9QXZ9-1
or a 1:1 ortholog thereof." [
PMID:10632589
,
PMID:19793992
, PRO:HJD]
PRO Category
sequence
Parent
PR:000001243
melanopsin
Terms by PRO Category
Organism-Independent
Organism-Specific
Category
Number of Terms
Category
Number of Terms
Sequence
1
Organism-Sequence
1
Modification
0
Organism-Modification
0
Term Hierarchy
Visualization
DAG:
OLS:
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Protein Forms
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Compact View
Category
PRO ID
Name
Short Name
Definition
Ann.
Has Annotation?
comp.
In Complex?
sequence
PR:000035677
melanopsin isoform 1
OPN4/iso:1
"A melanopsin that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9QXZ9-1 or a 1:1 ortholog thereof." [PMID:10632589, PMID:19793992, PRO:HJD]
organism-sequence
PR:Q9QXZ9-1
melanopsin isoform 1 (mouse)
mOPN4/iso:1
"A melanopsin isoform 1 that is encoded in the genome of mouse." [PMID:10632589, PMID:19793992, PRO:HJD]
Yes
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Functional Annotation (GO-centric view)
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PRO Centric View
Biological Process GO Term
Protein Forms & Complexes
Evidence
GO:0016056
rhodopsin mediated signaling pathway
PR:Q9QXZ9-1
mOPN4/iso:1
MGI_ref:4438311;
PMID:19793992
Molecular Function GO Term
Protein Forms & Complexes
Evidence
GO:0008020
G protein-coupled photoreceptor activity
PR:Q9QXZ9-1
mOPN4/iso:1
MGI_ref:4438311;
PMID:19793992
Cellular Location GO Term
Protein Forms & Complexes
Evidence
GO:0005886
plasma membrane
PR:Q9QXZ9-1
mOPN4/iso:1
MGI_ref:4438311;
PMID:19793992
