Home
|
Linked Open Data
|
Browse
|
Search
|
Statistics
|
Download
RACE-PRO
PRO tracker
Community
PRO Consortium
Publications
Documentation
Protein Ontology report - melanopsin isoform 1
PR:000035677 -
http://purl.obolibrary.org/obo/PR_000035677
Protein Forms
Annotations
Ontology Information
Show OBO stanza
PRO ID
PR:000035677
PRO name
melanopsin isoform 1
Synonyms
PRO-Short-label
:
EXACT:
OPN4/iso:1
Definition
"A melanopsin that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by
UniProtKB:Q9QXZ9-1
or a 1:1 ortholog thereof." [
PMID:10632589
,
PMID:19793992
, PRO:HJD]
PRO Category
sequence
Parent
PR:000001243
melanopsin
Terms by PRO Category
Organism-Independent
Organism-Specific
Category
Number of Terms
Category
Number of Terms
Sequence
1
Organism-Sequence
1
Modification
0
Organism-Modification
0
Term Hierarchy
Visualization
DAG:
OLS:
Back to top
Protein Forms
Switch to
Compact View
Category
PRO ID
Name
Short Name
Definition
Ann.
Has Annotation?
comp.
In Complex?
sequence
PR:000035677
melanopsin isoform 1
OPN4/iso:1
"A melanopsin that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9QXZ9-1 or a 1:1 ortholog thereof." [PMID:10632589, PMID:19793992, PRO:HJD]
organism-sequence
PR:Q9QXZ9-1
melanopsin isoform 1 (mouse)
mOPN4/iso:1
"A melanopsin isoform 1 that is encoded in the genome of mouse." [PMID:10632589, PMID:19793992, PRO:HJD]
Yes
Back to top
Functional Annotation (PRO-centric view)
Switch to
GO Centric View
PRO Term
GO Annotation
Evidence
PR:Q9QXZ9-1
mOPN4/iso:1
acts_upstream_of_or_within
GO:0016056
rhodopsin mediated signaling pathway
MGI_ref:4438311;
PMID:19793992
enables
GO:0008020
G protein-coupled photoreceptor activity
MGI_ref:4438311;
PMID:19793992
located_in
GO:0005886
plasma membrane
MGI_ref:4438311;
PMID:19793992
