Protein Ontology Report - mRARA PR:P11416 - http://purl.obolibrary.org/obo/PR_P11416

This page represents a class of proteins encompassing all the protein products of the Rara gene in Mus musculus.

Ontology Information
PRO ID	PR:P11416 Show OBO stanza / PAF / GPI
PRO name	retinoic acid receptor alpha (mouse)
Synonyms	PRO-short-label: EXACT: mRARA Gene-based: RELATED: Nr1b1 | Rara Other: EXACT: RAR-alpha (mouse) | nuclear receptor subfamily 1 group B member 1 (mouse)
Definition	A retinoic acid receptor alpha that is encoded in the genome of mouse. [OMA:P11416, PRO:DNx]
PRO Category	organism-gene
Parent	PR:000013736 retinoic acid receptor alpha
Gene Template	MGI:97856 Rara
Taxon	NCBITaxon:10090 Mus musculus
Terms by PRO Category	Retrieve All terms OBO Stanza / PAF Organism-Specific Category Number of Terms organism-gene 1 organism-sequence 2 organism-modification 1
Term Hierarchy Visualization	DAG     OLS     Cytoscape

Related Cross References
DB identifiers	UniProtKB:P11416

Interactive Sequence View Select/align proteoforms across species

Protein Forms Display Category: All All organism-gene organism-sequence organism-modification
PRO ID & Category Annotation Complex Name Short Label Definition & Comment

Functional Annotation PRO Centric View GO Centric View

PRO Term GO Annotation Evidence PR:P11416-1 mRARA/iso:1 acts_upstream_of_or_within GO:0006355 regulation of DNA-templated transcription PMID:12101409 acts_upstream_of_or_within GO:0000122 negative regulation of transcription by RNA polymerase II PMID:8152920 acts_upstream_of_or_within GO:0006355 regulation of DNA-templated transcription PMID:12079996 acts_upstream_of_or_within GO:0045947 negative regulation of translational initiation MGI:3803427, PMID:18495661 acts_upstream_of_or_within GO:0045892 negative regulation of DNA-templated transcription PMID:11641275 enables GO:0004879 nuclear receptor activity PMID:15528198 enables GO:0004879 nuclear receptor activity PMID:15322135 enables GO:0043565 sequence-specific DNA binding PMID:17928865 enables GO:0005515 protein binding with PR:Q8CBD1 mNRIP1 PMID:10531331 enables GO:0003700 DNA-binding transcription factor activity PMID:15528198 enables GO:0003700 DNA-binding transcription factor activity PMID:8152920 enables GO:0003677 DNA binding PMID:15528198 enables GO:0003677 DNA binding PMID:14980219 enables GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding MGI:3053708, PMID:1655807 enables GO:0005515 protein binding with PR:Q64127 mTRIM24 PMID:8978696 located_in GO:0005737 cytoplasm PMID:12079996 located_in GO:0005634 nucleus with CHEBI:15367 PMID:12079996 located_in GO:0043025 neuronal cell body MGI:3803427, PMID:18495661 located_in GO:0030425 dendrite MGI:3803427, PMID:18495661 PR:P11416 mRARA acts_upstream_of_or_within GO:0045944 positive regulation of transcription by RNA polymerase II PMID:7823919 acts_upstream_of_or_within GO:0001657 ureteric bud development PMID:12195422 acts_upstream_of_or_within GO:0030852 regulation of granulocyte differentiation PMID:11222375 acts_upstream_of_or_within GO:0045944 positive regulation of transcription by RNA polymerase II PMID:15766748 acts_upstream_of_or_within GO:0010629 negative regulation of gene expression PMID:18026104 acts_upstream_of_or_within GO:0008284 positive regulation of cell population proliferation PMID:18026104 acts_upstream_of_or_within GO:0007283 spermatogenesis MGI:61760, PMID:8394014 acts_upstream_of_or_within GO:0032526 response to retinoic acid PMID:11222375 acts_upstream_of_or_within GO:0055012 ventricular cardiac muscle cell differentiation PMID:9428411 acts_upstream_of_or_within GO:0000122 negative regulation of transcription by RNA polymerase II PMID:7566114 enables GO:0043565 sequence-specific DNA binding PMID:7823919 Cellular Location GO Term Protein Forms & Complexes Evidence GO:0005634 nucleus PR:P11416-1 mRARA/iso:1 with CHEBI:15367 PMID:12079996 GO:0005737 cytoplasm PR:P11416-1 mRARA/iso:1 PMID:12079996 GO:0030425 dendrite PR:P11416-1 mRARA/iso:1 MGI:3803427, PMID:18495661 GO:0043025 neuronal cell body PR:P11416-1 mRARA/iso:1 MGI:3803427, PMID:18495661

top