Protein Ontology Report - mKDM1B PR:Q8CIG3 - http://purl.obolibrary.org/obo/PR_Q8CIG3

This page represents a class of proteins encompassing all the protein products of the Kdm1b gene in Mus musculus.

Ontology Information
PRO ID	PR:Q8CIG3 Show OBO stanza / PAF / GPI
PRO name	lysine-specific histone demethylase 1B (mouse)
Synonyms	PRO-short-label: EXACT: mKDM1B Gene-based: RELATED: Aof1 | Kdm1b | Lsd2 Other: EXACT: flavin-containing amine oxidase domain-containing protein 1 (mouse) | lysine-specific histone demethylase 2 (mouse)
Definition	A lysine-specific histone demethylase 2 that is encoded in the genome of mouse. [OMA:Q8CIG3, PRO:DNx]
PRO Category	organism-gene
Parent	PR:000003320 lysine-specific histone demethylase 2
Gene Template	MGI:2145261 Kdm1b
Taxon	NCBITaxon:10090 Mus musculus
Terms by PRO Category	Retrieve All terms OBO Stanza / PAF Organism-Specific Category Number of Terms organism-gene 1 organism-sequence 3 organism-modification 0
Term Hierarchy Visualization	DAG     OLS     Cytoscape

Related Cross References
DB identifiers	UniProtKB:Q8CIG3

Interactive Sequence View Select/align proteoforms across species

Protein Forms Display Category: All All organism-gene organism-sequence
PRO ID & Category Annotation Complex Name Short Label Definition & Comment

Functional Annotation PRO Centric View GO Centric View

PRO Term GO Annotation Evidence PR:Q8CIG3 mKDM1B acts_upstream_of_or_within GO:0006349 regulation of gene expression by genomic imprinting PMID:19727073 acts_upstream_of_or_within GO:0043046 DNA methylation involved in gamete generation PMID:19727073 PR:Q8CIG3-1 mKDM1B/iso:1 acts_upstream_of_or_within GO:0034720 histone H3-K4 demethylation PMID:19727073 enables GO:0034647 histone H3K4me/H3K4me2/H3K4me3 demethylase activity PMID:19407342 enables GO:0034647 histone H3K4me/H3K4me2/H3K4me3 demethylase activity PMID:19727073 enables GO:0008270 zinc ion binding PMID:19407342 enables GO:0050660 flavin adenine dinucleotide binding PMID:19407342 enables GO:0034720 histone H3-K4 demethylation PMID:19407342 located_in GO:0005634 nucleus PMID:19727073 Cellular Location GO Term Protein Forms & Complexes Evidence GO:0005634 nucleus PR:Q8CIG3-1 mKDM1B/iso:1 PMID:19727073

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