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Protein Ontology report - melanopsin
PR:000001243 - http://purl.obolibrary.org/obo/PR_000001243
 
  Protein Forms  Annotations      
Ontology Information Show OBO stanza
  PRO ID
PR:000001243   
  PRO namemelanopsin 
  Synonyms
PRO-Short-label: EXACT:OPN4
Gene-based: RELATED:MOP | Mopn
Other: EXACT:opsin-4
  Definition"An animal opsin that is a translation product of the human OPN4 gene or a 1:1 ortholog thereof." [PRO:WCB] 
  PRO Categorygene 
  ParentPR:000001119 animal opsin
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene1                                                  Organism-Gene 4                                        
         Sequence2                                                  Organism-Sequence 4                                        
         Modification0                                                  Organism-Modification 0                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Related Cross References

  Db identifiers
IUPHARobj:2758
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Protein Forms Switch to Compact View   

Category  

PRO ID

Name

Short Name

Definition

Ann. Has Annotation?

Comp. In Complex?
gene



PR:000001243

melanopsin

OPN4


"An animal opsin that is a translation product of the human OPN4 gene or a 1:1 ortholog thereof." [PRO:WCB]


organism-gene



PR:P08099

opsin Rh2 (fruit fly)

fly-OPN4


"A melanopsin that is encoded in the genome of fruit fly." [OMA:P08099, PRO:DNx]


organism-gene



PR:Q8R456

melanopsin (rat)

rOPN4


"A melanopsin that is encoded in the genome of rat." [OMA:Q8R456, PRO:DNx]


organism-gene



PR:Q9QXZ9

melanopsin (mouse)

mOPN4


"A melanopsin that is encoded in the genome of mouse." [OMA:Q9QXZ9, PRO:DNx]


organism-sequence



PR:Q9QXZ9-1

melanopsin isoform 1 (mouse)

mOPN4/iso:1


"A melanopsin isoform 1 that is encoded in the genome of mouse." [PMID:10632589, PMID:19793992, PRO:HJD]

Yes

organism-sequence



PR:Q9QXZ9-2

melanopsin isoform 2 (mouse)

mOPN4/iso:2


"A melanopsin isoform 2 that is encoded in the genome of mouse." [PMID:19793992, PRO:HJD]

Yes

organism-gene



PR:Q9UHM6

melanopsin (human)

hOPN4


"A melanopsin that is encoded in the genome of human." [PRO:WCB, UniProtKB:Q9UHM6]


organism-sequence



PR:Q9UHM6-1

melanopsin isoform h1 (human)

hOPN4/iso:h1


"A melanopsin (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9UHM6-1." [PRO:DNx, UniProtKB:Q9UHM6]


organism-sequence



PR:Q9UHM6-2

melanopsin isoform h2 (human)

hOPN4/iso:h2


"A melanopsin (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9UHM6-2." [PRO:DNx, UniProtKB:Q9UHM6]


sequence



PR:000035677

melanopsin isoform 1

OPN4/iso:1


"A melanopsin that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9QXZ9-1 or a 1:1 ortholog thereof." [PMID:10632589, PMID:19793992, PRO:HJD]


organism-sequence



PR:Q9QXZ9-1

melanopsin isoform 1 (mouse)

mOPN4/iso:1


"A melanopsin isoform 1 that is encoded in the genome of mouse." [PMID:10632589, PMID:19793992, PRO:HJD]

Yes

sequence



PR:000035679

melanopsin isoform 2

OPN4/iso:2


"A melanopsin that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9QXZ9-2 or a 1:1 ortholog thereof." [PMID:19793992, PRO:HJD]


organism-sequence



PR:Q9QXZ9-2

melanopsin isoform 2 (mouse)

mOPN4/iso:2


"A melanopsin isoform 2 that is encoded in the genome of mouse." [PMID:19793992, PRO:HJD]

Yes

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Functional Annotation (PRO-centric view) Switch to GO Centric View   
PRO Term GO Annotation Evidence
PR:Q9QXZ9-1 mOPN4/iso:1 acts_upstream_of_or_withinGO:0016056 G protein-coupled opsin signaling pathway MGI_ref:4438311; PMID:19793992
enablesGO:0008020 G protein-coupled photoreceptor activity MGI_ref:4438311; PMID:19793992
located_inGO:0005886 plasma membrane MGI_ref:4438311; PMID:19793992
PR:Q9QXZ9-2 mOPN4/iso:2 acts_upstream_of_or_withinGO:0016056 G protein-coupled opsin signaling pathway MGI_ref:4438311; PMID:19793992
enablesGO:0008020 G protein-coupled photoreceptor activity MGI_ref:4438311; PMID:19793992
located_inGO:0005886 plasma membrane MGI_ref:4438311; PMID:19793992