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Protein Ontology report - semaphorin-4D
PR:000002084 - http://purl.obolibrary.org/obo/PR_000002084
 
  Protein Forms      
Ontology Information Show OBO stanza
  PRO ID
PR:000002084   
  PRO namesemaphorin-4D 
  Synonyms
PRO-Short-label: EXACT:SEMA4D
Gene-based: RELATED:C9orf164 | CD100 | Semacl2 | SEMAJ
Other: EXACT:A8 | BB18 | GR3 | M-Sema G | Sema J | semaphorin-C-like 2 | semaphorin-J
  Definition"A semaphorin that is a translation product of the human SEMA4D gene or a 1:1 ortholog thereof." [PRO:WCB] 
  PRO Categorygene 
  ParentPR:000001926 semaphorin
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene1                                                  Organism-Gene 2                                        
         Sequence0                                                  Organism-Sequence 2                                        
         Modification0                                                  Organism-Modification 8                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Related Cross References

  Db identifiers
IUPHARobj:2883
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Protein Forms Switch to Compact View   

Category  

PRO ID

Name

Short Name

Definition

Ann. Has Annotation?

Comp. In Complex?
gene



PR:000002084

semaphorin-4D

SEMA4D


"A semaphorin that is a translation product of the human SEMA4D gene or a 1:1 ortholog thereof." [PRO:WCB]


organism-gene



PR:O09126

semaphorin-4D (mouse)

mSEMA4D


"A semaphorin-4D that is encoded in the genome of mouse." [OMA:O09126, PRO:DNx]


organism-modification



PR:000083007

semaphorin-4D deaminated 1 (mouse)

mSEMA4D/Deam:1


"A semaphorin-4D (mouse) that has been deaminated on the residue at the position equivalent to Gln-497 of the amino acid sequence represented by UniProtKB:O09126. UniProtKB:O09126, Gln-497, MOD:00685." [IEDB_epitope:2136232, IEDB_epitope:2136442, IEDB_epitope:2137207, PRO:DNx]


organism-gene



PR:Q92854

semaphorin-4D (human)

hSEMA4D


"A semaphorin-4D that is encoded in the genome of human." [PRO:WCB, UniProtKB:Q92854]


organism-sequence



PR:Q92854-1

semaphorin-4D isoform h1 (human)

hSEMA4D/iso:h1


"A semaphorin-4D (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q92854-1." [PRO:DNx, UniProtKB:Q92854]


organism-sequence



PR:Q92854-2

semaphorin-4D isoform h2 (human)

hSEMA4D/iso:h2


"A semaphorin-4D (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q92854-2." [PRO:DNx, UniProtKB:Q92854]


organism-modification



PR:000049197

semaphorin-4D, signal peptide removed form (human)

hSEMA4D/SigPep-


"A semaphorin-4D (human) that has had the signal peptide removed. UniProtKB:Q92854, 22-862." [PRO:DNx, Reactome:R-HSA-197744]


organism-modification



PR:000057800

semaphorin-4D O-glycosylated 1 (human)

hSEMA4D/OGlyco:1


"A semaphorin-4D (human) that has been O-glycosylated at the residue equivalent to Thr-657 of the amino acid sequence represented by UniProtKB:Q92854-1, in which the glycan composition is represented by GlyTouCan:G43417UB. Example: UniProtKB:Q92854-1, Thr-657, MOD:00005~GNO:G43417UB." [GlyGen:Q92854-1, PMID:30459171, PRO:DNx]


organism-modification



PR:000057801

semaphorin-4D O-glycosylated 2 (human)

hSEMA4D/OGlyco:2


"A semaphorin-4D (human) that has been O-glycosylated at the residue equivalent to Thr-696 of the amino acid sequence represented by UniProtKB:Q92854-1, in which the glycan composition is represented by GlyTouCan:G43417UB. Example: UniProtKB:Q92854-1, Thr-696, MOD:00005~GNO:G43417UB." [GlyGen:Q92854-1, PMID:30459171, PRO:DNx]


organism-modification



PR:000072078

semaphorin-4D deaminated 1 (human)

hSEMA4D/Deam:1


"A semaphorin-4D (human) that has been deaminated on the residue at the position equivalent to Gln-544 of the amino acid sequence represented by UniProtKB:Q92854-1. Example: UniProtKB:Q92854-1, Gln-544, MOD:00685." [IEDB_epitope:1787157, PRO:DNx]


organism-modification



PR:000073657

semaphorin-4D deaminated 2 (human)

hSEMA4D/Deam:2


"A semaphorin-4D (human) that has been deaminated on the residue at the position equivalent to Gln-719 of the amino acid sequence represented by UniProtKB:Q92854-1. Example: UniProtKB:Q92854-1, Gln-719, MOD:00685." [IEDB_epitope:1742864, PRO:DNx]


organism-modification



PR:000080237

semaphorin-4D deaminated 3 (human)

hSEMA4D/Deam:3


"A semaphorin-4D (human) that has been deaminated on the residue at the position equivalent to Asn-715 of the amino acid sequence represented by UniProtKB:Q92854-1. Example: UniProtKB:Q92854-1, Asn-715, MOD:00684." [IEDB_epitope:1742863, PRO:DNx]


organism-modification



PR:000082313

semaphorin-4D deaminated 4 (human)

hSEMA4D/Deam:4


"A semaphorin-4D (human) that has been deaminated on the residue at the position equivalent to Gln-116 of the amino acid sequence represented by UniProtKB:Q92854-1. Example: UniProtKB:Q92854-1, Gln-116, MOD:00685." [IEDB_epitope:1790159, PRO:DNx]