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Protein Ontology report - Y-box-binding protein 3
PR:000003243 - http://purl.obolibrary.org/obo/PR_000003243
 
  Protein Forms  Annotations      
Ontology Information Show OBO stanza
  PRO ID
PR:000003243   
  PRO nameY-box-binding protein 3 
  Synonyms
PRO-Short-label: EXACT:YBX3
Gene-based: RELATED:CSDA | DBPA | Msy4
Other: EXACT:cold shock domain-containing protein A | DNA-binding protein A | single-strand DNA-binding protein NF-GMB | Y-box protein 3
  Definition"A protein that is a translation product of the human YBX3 gene or a 1:1 ortholog thereof." [MGI:2137670, PRO:HJD] 
  PRO Categorygene 
  ParentPR:000000001 protein
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene1                                                  Organism-Gene 3                                        
         Sequence2                                                  Organism-Sequence 7                                        
         Modification0                                                  Organism-Modification 3                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Protein Forms Switch to Compact View   

Category  

PRO ID

Name

Short Name

Definition

Ann. Has Annotation?

Comp. In Complex?
gene



PR:000003243

Y-box-binding protein 3

YBX3


"A protein that is a translation product of the human YBX3 gene or a 1:1 ortholog thereof." [MGI:2137670, PRO:HJD]


organism-gene



PR:P16989

Y-box-binding protein 3 (human)

hYBX3


"A Y-box-binding protein 3 that is encoded in the genome of human." [PRO:HJD, UniProtKB:P16989]


organism-sequence



PR:P16989-1

Y-box-binding protein 3 isoform h1 (human)

hYBX3/iso:h1


"A Y-box-binding protein 3 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P16989-1." [PRO:DNx, UniProtKB:P16989]


organism-sequence



PR:P16989-2

Y-box-binding protein 3 isoform h2 (human)

hYBX3/iso:h2


"A Y-box-binding protein 3 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P16989-2." [PRO:DNx, UniProtKB:P16989]


organism-sequence



PR:P16989-3

Y-box-binding protein 3 isoform h3 (human)

hYBX3/iso:h3


"A Y-box-binding protein 3 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P16989-3." [PRO:DNx, UniProtKB:P16989]


organism-modification



PR:000072716

Y-box-binding protein 3 deaminated 1 (human)

hYBX3/Deam:1


"A Y-box-binding protein 3 (human) that has been deaminated on the residue at the position equivalent to Gln-278 of the amino acid sequence represented by UniProtKB:P16989-1. Example: UniProtKB:P16989-1, Gln-278, MOD:00685." [IEDB_epitope:1980788, PRO:DNx]


organism-modification



PR:000073692

Y-box-binding protein 3 phosphorylated 1 (human)

hYBX3/Phos:1


"A Y-box-binding protein 3 (human) that has been phosphorylated on the residue at the position equivalent to Ser-134 of the amino acid sequence represented by UniProtKB:P16989-1. Example: UniProtKB:P16989-1, Ser-134, MOD:00046." [IEDB_epitope:1376618, PRO:DNx]


organism-modification



PR:000075199

Y-box-binding protein 3 methylated 1 (human)

hYBX3/Me:1


"A Y-box-binding protein 3 (human) that has been methylated on the residue at the position equivalent to Arg-179 of the amino acid sequence represented by UniProtKB:P16989-1. Example: UniProtKB:P16989-1, Arg-179, MOD:00658." [IEDB_epitope:569314, PRO:DNx]


organism-gene



PR:Q62764

Y-box-binding protein 3 (rat)

rYBX3


"A Y-box-binding protein 3 that is encoded in the genome of rat." [OMA:Q62764, PRO:DNx]


organism-sequence



PR:Q62764-1

Y-box-binding protein 3 isoform r1 (rat)

rYBX3/iso:r1


"A Y-box-binding protein 3 (rat) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q62764-1." [PRO:DNx, UniProtKB:Q62764]


organism-sequence



PR:Q62764-2

Y-box-binding protein 3 isoform r2 (rat)

rYBX3/iso:r2


"A Y-box-binding protein 3 (rat) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q62764-2." [PRO:DNx, UniProtKB:Q62764]


organism-gene



PR:Q9JKB3

Y-box-binding protein 3 (mouse)

mYBX3


"A Y-box-binding protein 3 that is encoded in the genome of mouse." [OMA:Q9JKB3, PRO:DNx]

Yes

organism-sequence



PR:Q9JKB3-1

Y-box-binding protein 3 isoform 1 (mouse)

mYBX3/iso:1


"A Y-box-binding protein 3 isoform 1 that is encoded in the genome of mouse." [PMID:10956549, PRO:HJD]

Yes

organism-sequence



PR:Q9JKB3-2

Y-box-binding protein 3 isoform 2 (mouse)

mYBX3/iso:2


"A Y-box-binding protein 3 isoform 2 that is encoded in the genome of mouse." [PMID:10956549, PRO:HJD]

Yes

sequence



PR:000035912

Y-box-binding protein 3 isoform 1

YBX3/iso:1


"A Y-box-binding protein 3 that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9JKB3-1 or a 1:1 ortholog thereof." [PMID:10956549, PRO:HJD]


organism-sequence



PR:Q9JKB3-1

Y-box-binding protein 3 isoform 1 (mouse)

mYBX3/iso:1


"A Y-box-binding protein 3 isoform 1 that is encoded in the genome of mouse." [PMID:10956549, PRO:HJD]

Yes

sequence



PR:000035928

Y-box-binding protein 3 isoform 2

YBX3/iso:2


"A Y-box-binding protein 3 that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9JKB3-2 or a 1:1 ortholog thereof." [PMID:10956549, PRO:HJD]


organism-sequence



PR:Q9JKB3-2

Y-box-binding protein 3 isoform 2 (mouse)

mYBX3/iso:2


"A Y-box-binding protein 3 isoform 2 that is encoded in the genome of mouse." [PMID:10956549, PRO:HJD]

Yes

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Functional Annotation (PRO-centric view) Switch to GO Centric View   
PRO Term GO Annotation Evidence
PR:Q9JKB3 mYBX3 acts_upstream_of_or_withinGO:0001701 in utero embryonic development PMID:16954378
GO:0007283 spermatogenesis PMID:16954378
GO:0009566 fertilization PMID:16954378
GO:0043066 negative regulation of apoptotic process PMID:16954378
GO:0046622 positive regulation of organ growth PMID:16954378
PR:Q9JKB3-1 mYBX3/iso:1 enablesGO:0003697 single-stranded DNA binding MGI_ref:3808638; PMID:18676817
PR:Q9JKB3-2 mYBX3/iso:2 enablesGO:0003697 single-stranded DNA binding MGI_ref:3808638; PMID:18676817