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Protein Ontology report - collagen alpha-3(VI) chain
PR:000003341 - http://purl.obolibrary.org/obo/PR_000003341
 
  Protein Forms      
Ontology Information Show OBO stanza
  PRO ID
PR:000003341   
  PRO namecollagen alpha-3(VI) chain 
  Synonyms
PRO-Short-label: EXACT:COL6A3
  Definition"A collagen type VI alpha chain that is a translation product of the human COL6A3 gene or a 1:1 ortholog thereof." [PRO:CNA] 
  PRO Categorygene 
  ParentPR:000003386 collagen type VI alpha chain
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene1                                                  Organism-Gene 2                                        
         Sequence1                                                  Organism-Sequence 6                                        
         Modification2                                                  Organism-Modification 18                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Protein Forms Switch to Compact View   

Category  

PRO ID

Name

Short Name

Definition

Ann. Has Annotation?

Comp. In Complex?
gene



PR:000003341

collagen alpha-3(VI) chain

COL6A3


"A collagen type VI alpha chain that is a translation product of the human COL6A3 gene or a 1:1 ortholog thereof." [PRO:CNA]


organism-gene



PR:000050024

collagen alpha-3(VI) chain (mouse)

mCOL6A3


"A collagen alpha-3(VI) chain that is encoded in the genome of mouse." [PRO:DAN]


organism-sequence



PR:J3QQ16

collagen, type VI, alpha 3 isoform J3QQ16 (mouse)

mCOL6A3/iso:J3QQ16


"A collagen alpha-3(VI) chain (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:J3QQ16." [PMID:28071719, PRO:DAN, UniProtKB:J3QQ16]


organism-gene



PR:P12111

collagen alpha-3(VI) chain (human)

hCOL6A3


"A collagen alpha-3(VI) chain that is encoded in the genome of human." [PRO:CNA, UniProtKB:P12111]


organism-sequence



PR:P12111-1

collagen alpha-3(VI) chain isoform 1 (human)

hCOL6A3/iso:1


"A collagen alpha-3(VI) chain isoform 1 that is encoded in the genome of human." [PRO:CNA]


organism-sequence



PR:P12111-2

collagen alpha-3(VI) chain isoform h2 (human)

hCOL6A3/iso:h2


"A collagen alpha-3(VI) chain (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P12111-2." [PRO:DNx, UniProtKB:P12111]


organism-sequence



PR:P12111-3

collagen alpha-3(VI) chain isoform h3 (human)

hCOL6A3/iso:h3


"A collagen alpha-3(VI) chain (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P12111-3." [PRO:DNx, UniProtKB:P12111]


organism-sequence



PR:P12111-4

collagen alpha-3(VI) chain isoform h4 (human)

hCOL6A3/iso:h4


"A collagen alpha-3(VI) chain (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P12111-4." [PRO:DNx, UniProtKB:P12111]


organism-sequence



PR:P12111-5

collagen alpha-3(VI) chain isoform h5 (human)

hCOL6A3/iso:h5


"A collagen alpha-3(VI) chain (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P12111-5." [PRO:DNx, UniProtKB:P12111]


organism-modification



PR:000054975

collagen alpha-3(VI) chain O-glycosylated 1 (human)

hCOL6A3/OGlyco:1


"A collagen alpha-3(VI) chain (human) that has been O-glycosylated at the residue equivalent to Ser-3100 of the amino acid sequence represented by UniProtKB:P12111-1, in which the glycan composition is represented by GlyTouCan:G43417UB. Example: UniProtKB:P12111-1, Ser-3100, MOD:00002~GNO:G43417UB." [GlyGen:P12111-1, PMID:30459171, PRO:DNx]


organism-modification



PR:000054976

collagen alpha-3(VI) chain O-glycosylated 2 (human)

hCOL6A3/OGlyco:2


"A collagen alpha-3(VI) chain (human) that has been O-glycosylated at the residue equivalent to Ser-3100 of the amino acid sequence represented by UniProtKB:P12111-1, in which the glycan composition is represented by GlyTouCan:G53434XO. Example: UniProtKB:P12111-1, Ser-3100, MOD:00002~GNO:G53434XO." [GlyGen:P12111-1, PMID:30459171, PRO:DNx]


organism-modification



PR:000054977

collagen alpha-3(VI) chain O-glycosylated 3 (human)

hCOL6A3/OGlyco:3


"A collagen alpha-3(VI) chain (human) that has been O-glycosylated at the residue equivalent to Thr-1423 of the amino acid sequence represented by UniProtKB:P12111-1, in which the glycan composition is represented by GlyTouCan:G43417UB. Example: UniProtKB:P12111-1, Thr-1423, MOD:00005~GNO:G43417UB." [GlyGen:P12111-1, PMID:30459171, PRO:DNx]


organism-modification



PR:000054978

collagen alpha-3(VI) chain O-glycosylated 4 (human)

hCOL6A3/OGlyco:4


"A collagen alpha-3(VI) chain (human) that has been O-glycosylated at the residue equivalent to Thr-1619 of the amino acid sequence represented by UniProtKB:P12111-1, in which the glycan composition is represented by GlyTouCan:G29068FM. Example: UniProtKB:P12111-1, Thr-1619, MOD:00005~GNO:G29068FM." [GlyGen:P12111-1, PMID:30459171, PRO:DNx]


organism-modification



PR:000054979

collagen alpha-3(VI) chain O-glycosylated 5 (human)

hCOL6A3/OGlyco:5


"A collagen alpha-3(VI) chain (human) that has been O-glycosylated at the residue equivalent to Thr-1619 of the amino acid sequence represented by UniProtKB:P12111-1, in which the glycan composition is represented by GlyTouCan:G43417UB. Example: UniProtKB:P12111-1, Thr-1619, MOD:00005~GNO:G43417UB." [GlyGen:P12111-1, PMID:30459171, PRO:DNx]


organism-modification



PR:000054980

collagen alpha-3(VI) chain O-glycosylated 6 (human)

hCOL6A3/OGlyco:6


"A collagen alpha-3(VI) chain (human) that has been O-glycosylated at the residue equivalent to Thr-1619 of the amino acid sequence represented by UniProtKB:P12111-1, in which the glycan composition is represented by GlyTouCan:G53434XO. Example: UniProtKB:P12111-1, Thr-1619, MOD:00005~GNO:G53434XO." [GlyGen:P12111-1, PMID:30459171, PRO:DNx]


organism-modification



PR:000054981

collagen alpha-3(VI) chain O-glycosylated 7 (human)

hCOL6A3/OGlyco:7


"A collagen alpha-3(VI) chain (human) that has been O-glycosylated at the residue equivalent to Thr-1619 of the amino acid sequence represented by UniProtKB:P12111-1, in which the glycan composition is represented by GlyTouCan:G58001LT. Example: UniProtKB:P12111-1, Thr-1619, MOD:00005~GNO:G58001LT." [GlyGen:P12111-1, PMID:30459171, PRO:DNx]


organism-modification



PR:000054982

collagen alpha-3(VI) chain O-glycosylated 8 (human)

hCOL6A3/OGlyco:8


"A collagen alpha-3(VI) chain (human) that has been O-glycosylated at the residue equivalent to Thr-1627 of the amino acid sequence represented by UniProtKB:P12111-1, in which the glycan composition is represented by GlyTouCan:G29068FM. Example: UniProtKB:P12111-1, Thr-1627, MOD:00005~GNO:G29068FM." [GlyGen:P12111-1, PMID:30459171, PRO:DNx]


organism-modification



PR:000054983

collagen alpha-3(VI) chain O-glycosylated 9 (human)

hCOL6A3/OGlyco:9


"A collagen alpha-3(VI) chain (human) that has been O-glycosylated at the residue equivalent to Thr-1627 of the amino acid sequence represented by UniProtKB:P12111-1, in which the glycan composition is represented by GlyTouCan:G43417UB. Example: UniProtKB:P12111-1, Thr-1627, MOD:00005~GNO:G43417UB." [GlyGen:P12111-1, PMID:30459171, PRO:DNx]


organism-modification



PR:000054984

collagen alpha-3(VI) chain O-glycosylated 10 (human)

hCOL6A3/OGlyco:10


"A collagen alpha-3(VI) chain (human) that has been O-glycosylated at the residue equivalent to Thr-3101 of the amino acid sequence represented by UniProtKB:P12111-1, in which the glycan composition is represented by GlyTouCan:G29068FM. Example: UniProtKB:P12111-1, Thr-3101, MOD:00005~GNO:G29068FM." [GlyGen:P12111-1, PMID:30459171, PRO:DNx]


organism-modification



PR:000054985

collagen alpha-3(VI) chain O-glycosylated 11 (human)

hCOL6A3/OGlyco:11


"A collagen alpha-3(VI) chain (human) that has been O-glycosylated at the residue equivalent to Thr-3101 of the amino acid sequence represented by UniProtKB:P12111-1, in which the glycan composition is represented by GlyTouCan:G43417UB. Example: UniProtKB:P12111-1, Thr-3101, MOD:00005~GNO:G43417UB." [GlyGen:P12111-1, PMID:30459171, PRO:DNx]


organism-modification



PR:000067449

collagen alpha-3(VI) chain deaminated 1 (human)

hCOL6A3/Deam:1


"A collagen alpha-3(VI) chain (human) that has been deaminated on the residue at the position equivalent to Gln-2477 of the amino acid sequence represented by UniProtKB:P12111-1. Example: UniProtKB:P12111-1, Gln-2477, MOD:00685." [IEDB_epitope:779298, PRO:DNx]


organism-modification



PR:000071871

collagen alpha-3(VI) chain methylated 1 (human)

hCOL6A3/Me:1


"A collagen alpha-3(VI) chain (human) that has been methylated on the residue at the position equivalent to Cys-3060 of the amino acid sequence represented by UniProtKB:P12111-1. Example: UniProtKB:P12111-1, Cys-3060, MOD:00660." [IEDB_epitope:1061370, PRO:DNx]


organism-modification



PR:000076122

collagen alpha-3(VI) chain deaminated 2 (human)

hCOL6A3/Deam:2


"A collagen alpha-3(VI) chain (human) that has been deaminated on the residue at the position equivalent to Gln-2525 of the amino acid sequence represented by UniProtKB:P12111-1. Example: UniProtKB:P12111-1, Gln-2525, MOD:00685." [IEDB_epitope:778239, PRO:DNx]


organism-modification



PR:000079719

collagen alpha-3(VI) chain deaminated 3 (human)

hCOL6A3/Deam:3


"A collagen alpha-3(VI) chain (human) that has been deaminated on the residue at the position equivalent to Gln-1071 of the amino acid sequence represented by UniProtKB:P12111-1. Example: UniProtKB:P12111-1, Gln-1071, MOD:00685." [IEDB_epitope:777776, PRO:DNx]


organism-modification



PR:000082439

collagen alpha-3(VI) chain cysteinylated 1 (human)

hCOL6A3/Cyst:1


"A collagen alpha-3(VI) chain (human) that has been cysteinylated on the residue at the position equivalent to Cys-3060 of the amino acid sequence represented by UniProtKB:P12111-1. Example: UniProtKB:P12111-1, Cys-3060, MOD:00765." [IEDB_epitope:779143, PRO:DNx]


organism-modification



PR:000083750

collagen alpha-3(VI) chain phosphorylated 1 (human)

hCOL6A3/Phos:1


"A collagen alpha-3(VI) chain (human) that has been phosphorylated on the residue at the position equivalent to Ser-1557 of the amino acid sequence represented by UniProtKB:P12111-1. Example: UniProtKB:P12111-1, Ser-1557, MOD:00046." [IEDB_epitope:2149152, PRO:DNx]


organism-modification



PR:000084183

collagen alpha-3(VI) chain deaminated 4 (human)

hCOL6A3/Deam:4


"A collagen alpha-3(VI) chain (human) that has been deaminated on the residue at the position equivalent to Asn-2452 of the amino acid sequence represented by UniProtKB:P12111-1. Example: UniProtKB:P12111-1, Asn-2452, MOD:00684." [IEDB_epitope:775696, PRO:DNx]


sequence



PR:000003342

collagen alpha-3(VI) chain isoform 1

COL6A3/iso:1


"A collagen alpha-3(VI) chain that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P12111-1 or a 1:1 ortholog thereof." [PRO:CNA]


organism-sequence



PR:P12111-1

collagen alpha-3(VI) chain isoform 1 (human)

hCOL6A3/iso:1


"A collagen alpha-3(VI) chain isoform 1 that is encoded in the genome of human." [PRO:CNA]


modification



PR:000003344

collagen alpha-3(VI) chain isoform 1, signal peptide removed form

COL6A3/iso:1/SigPep-


"A collagen alpha-3(VI) chain isoform 1 that has had the signal peptide removed. Example: UniProtKB:P12111-1, 26-3177." [PRO:CNA]


modification



PR:000025423

collagen alpha-3(VI) chain proteolytic cleavage product

COL6A3/ClvPrd


"A collagen alpha-3(VI) chain that has been processed by proteolytic cleavage." [PRO:DNx]