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Protein Ontology report - RNA-binding protein FXR1
PR:000003390 - http://purl.obolibrary.org/obo/PR_000003390
 
  Protein Forms  Annotations      
Ontology Information Show OBO stanza
  PRO ID
PR:000003390   
  PRO nameRNA-binding protein FXR1 
  Synonyms
PRO-Short-label: EXACT:FXR1
Gene-based: RELATED:Fxr1h
Other: EXACT:fragile X mental retardation syndrome-related protein 1 | FXR1p
  Definition"A fragile X-related protein that is a translation product of the human FXR1 gene or a 1:1 ortholog thereof." [MGI:104860, PRO:HJD] 
  PRO Categorygene 
  ParentPR:000003222 fragile X-related protein
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene1                                                  Organism-Gene 5                                        
         Sequence7                                                  Organism-Sequence 13                                        
         Modification1                                                  Organism-Modification 4                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Protein Forms  Switch to Extended View   

Category  
PRO Form Name
Short Name
Ann. Has Annotation?

Comp. In Complex?
gene


PR:000003390 RNA-binding protein FXR1
FXR1

organism-gene


PR:F1QLR3 RNA-binding protein FXR1 (zebrafish)
z-FXR1

organism-sequence


PR:F1QLR3-1 RNA-binding protein FXR1 isoform 1 (zebrafish)
z-FXR1/iso:1

organism-sequence


PR:F1QLR3-2 RNA-binding protein FXR1 isoform 2 (zebrafish)
z-FXR1/iso:2

organism-sequence


PR:F1QLR3-3 RNA-binding protein FXR1 isoform 3 (zebrafish)
z-FXR1/iso:3

organism-gene


PR:P51114 RNA-binding protein FXR1 (human)
hFXR1

organism-sequence


PR:P51114-1 RNA-binding protein FXR1 isoform D (human)
hFXR1/iso:D

organism-sequence


PR:P51114-2 RNA-binding protein FXR1 isoform A (human)
hFXR1/iso:A

organism-sequence


PR:P51114-3 RNA-binding protein FXR1 isoform 3 (human)
hFXR1/iso:3

organism-modification


PR:000045816 RNA-binding protein FXR1 phosphorylated 1 (human)
hFXR1/Phos:1

organism-modification


PR:000073243 RNA-binding protein FXR1 methylated 1 (human)
hFXR1/Me:1

organism-modification


PR:000074223 RNA-binding protein FXR1 methylated 2 (human)
hFXR1/Me:2

organism-modification


PR:000083483 RNA-binding protein FXR1 methylated 3 (human)
hFXR1/Me:3

organism-gene


PR:Q5F3S6 uncharacterized protein, RCJMB04_7n20 translation product (chicken)
chick-FXR1

organism-gene


PR:Q5XI81 RNA-binding protein FXR1 (rat)
rFXR1

organism-gene


PR:Q61584 RNA-binding protein FXR1 (mouse)
mFXR1

organism-sequence


PR:Q61584-1 RNA-binding protein FXR1 isoform E (mouse)
mFXR1/iso:E
Yes
organism-sequence


PR:Q61584-2 RNA-binding protein FXR1 isoform A (mouse)
mFXR1/iso:A
Yes
organism-sequence


PR:Q61584-3 RNA-binding protein FXR1 isoform B (mouse)
mFXR1/iso:B

organism-sequence


PR:Q61584-4 RNA-binding protein FXR1 isoform C (mouse)
mFXR1/iso:C

organism-sequence


PR:Q61584-5 RNA-binding protein FXR1 isoform D (mouse)
mFXR1/iso:D
Yes
organism-sequence


PR:Q61584-6 RNA-binding protein FXR1 isoform F (mouse)
mFXR1/iso:F
Yes
organism-sequence


PR:Q61584-7 RNA-binding protein FXR1 isoform G (mouse)
mFXR1/iso:G
Yes
sequence


PR:000003393 RNA-binding protein FXR1 isoform E
FXR1/iso:E

organism-sequence


PR:Q61584-1 RNA-binding protein FXR1 isoform E (mouse)
mFXR1/iso:E
Yes
sequence


PR:000003395 RNA-binding protein FXR1 isoform A
FXR1/iso:A

organism-sequence


PR:P51114-2 RNA-binding protein FXR1 isoform A (human)
hFXR1/iso:A

organism-sequence


PR:Q61584-2 RNA-binding protein FXR1 isoform A (mouse)
mFXR1/iso:A
Yes
sequence


PR:000003397 RNA-binding protein FXR1 isoform B
FXR1/iso:B

organism-sequence


PR:Q61584-3 RNA-binding protein FXR1 isoform B (mouse)
mFXR1/iso:B

sequence


PR:000003399 RNA-binding protein FXR1 isoform C
FXR1/iso:C

organism-sequence


PR:Q61584-4 RNA-binding protein FXR1 isoform C (mouse)
mFXR1/iso:C

sequence


PR:000003401 RNA-binding protein FXR1 isoform D
FXR1/iso:D

organism-sequence


PR:P51114-1 RNA-binding protein FXR1 isoform D (human)
hFXR1/iso:D

organism-sequence


PR:Q61584-5 RNA-binding protein FXR1 isoform D (mouse)
mFXR1/iso:D
Yes
sequence


PR:000003403 RNA-binding protein FXR1 isoform F
FXR1/iso:F

organism-sequence


PR:Q61584-6 RNA-binding protein FXR1 isoform F (mouse)
mFXR1/iso:F
Yes
sequence


PR:000003405 RNA-binding protein FXR1 isoform G
FXR1/iso:G

organism-sequence


PR:Q61584-7 RNA-binding protein FXR1 isoform G (mouse)
mFXR1/iso:G
Yes
modification


PR:000018816 RNA-binding protein FXR1, initiator methionine removed form
FXR1/InitMet-

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Functional Annotation (GO-centric view) Switch to PRO Centric View     

Biological Process GO Term
Protein Forms & Complexes
Evidence
GO:0017148 negative regulation of translationPR:Q61584-5 mFXR1/iso:D MGI_ref:3573966; PMID:15548538

Molecular Function GO Term
Protein Forms & Complexes
Evidence
GO:0002151 G-quadruplex RNA bindingPR:Q61584-1 mFXR1/iso:E MGI_ref:3699977; PMID:17170008
NOT GO:0002151 G-quadruplex RNA bindingPR:Q61584-2 mFXR1/iso:A MGI_ref:3699977; PMID:17170008
PR:Q61584-5 mFXR1/iso:D MGI_ref:3699977; PMID:17170008
GO:0003730 mRNA 3'-UTR bindingPR:Q61584-5 mFXR1/iso:D MGI_ref:3573966; PMID:15548538

Cellular Location GO Term
Protein Forms & Complexes
Evidence
GO:0005634 nucleusPR:Q61584-1 mFXR1/iso:E PMID:11178106
PR:Q61584-6 mFXR1/iso:F PMID:11178106
PR:Q61584-7 mFXR1/iso:G PMID:11178106
GO:0005737 cytoplasmPR:Q61584-1 mFXR1/iso:E MGI_ref:3760313; PMID:11178106
PR:Q61584-5 mFXR1/iso:D MGI_ref:3573966; PMID:15548538
PR:Q61584-6 mFXR1/iso:F PMID:11178106
PR:Q61584-7 mFXR1/iso:G MGI_ref:3760313; PMID:11178106
GO:0005840 ribosomePR:Q61584-1 mFXR1/iso:E MGI_ref:3760313; PMID:11178106
PR:Q61584-6 mFXR1/iso:F PMID:11178106
PR:Q61584-7 mFXR1/iso:G MGI_ref:3760313; PMID:11178106
GO:0043034 costamerePR:Q61584-1 mFXR1/iso:E PMID:15128702