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Protein Ontology report - spliceosome RNA helicase BAT1
PR:000004648 - http://purl.obolibrary.org/obo/PR_000004648
 
  Protein Forms      
Ontology Information Show OBO stanza
  PRO ID
PR:000004648   
  PRO namespliceosome RNA helicase BAT1 
  Synonyms
PRO-Short-label: EXACT:DDX39B
Gene-based: RELATED:BAT1 | Bat1a | UAP56
Other: EXACT:56 kDa U2AF65-associated protein | ATP-dependent RNA helicase p47 | DEAD box protein UAP56
NARROW:HLA-B-associated transcript 1 protein
  Definition"A protein that is a translation product of the human DDX39B gene or a 1:1 ortholog thereof." [PRO:DNx] 
  PRO Categorygene 
  ParentPR:000000001 protein
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene1                                                  Organism-Gene 8                                        
         Sequence1                                                  Organism-Sequence 4                                        
         Modification1                                                  Organism-Modification 2                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Protein Forms Switch to Compact View   

Category  

PRO ID

Name

Short Name

Definition

Ann. Has Annotation?

Comp. In Complex?
gene



PR:000004648

spliceosome RNA helicase BAT1

DDX39B


"A protein that is a translation product of the human DDX39B gene or a 1:1 ortholog thereof." [PRO:DNx]


organism-gene



PR:O13792

ATP-dependent RNA helicase uap56 (Schizosaccharomyces pombe 972h-)

Spom972h-DDX39B


"A spliceosome RNA helicase BAT1 that is encoded in the genome of Schizosaccharomyces pombe 972h-." [OMA:O13792, PRO:DNx]


organism-gene



PR:Q07478

ATP-dependent RNA helicase SUB2 (yeast)

yDDX39B


"A spliceosome RNA helicase BAT1 that is encoded in the genome of yeast." [OMA:Q07478, PRO:DNx]


organism-gene



PR:Q13838

spliceosome RNA helicase DDX39B (human)

hDDX39B


"A spliceosome RNA helicase BAT1 that is encoded in the genome of human." [PRO:DNx, UniProtKB:Q13838]


organism-sequence



PR:Q13838-1

spliceosome RNA helicase DDX39B isoform 1 (human)

hDDX39B/iso:1


"A spliceosome RNA helicase BAT1 isoform 1 that is encoded in the genome of human." [PRO:DNx]


organism-sequence



PR:Q13838-2

spliceosome RNA helicase DDX39B isoform h2 (human)

hDDX39B/iso:h2


"A spliceosome RNA helicase DDX39B (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q13838-2." [PRO:DNx, UniProtKB:Q13838]


organism-modification



PR:000047157

spliceosome RNA helicase DDX39B, initiator methionine removed form (human)

hDDX39B/InitMet-


"A spliceosome RNA helicase DDX39B (human) that has had the initiator methionine removed. UniProtKB:Q13838, 2-428." [PRO:DNx, Reactome:R-HSA-8849139]


organism-modification



PR:000067755

spliceosome RNA helicase DDX39B methylated 1 (human)

hDDX39B/Me:1


"A spliceosome RNA helicase DDX39B (human) that has been methylated on the residue at the position equivalent to Cys-198 of the amino acid sequence represented by UniProtKB:Q13838-1. Example: UniProtKB:Q13838-1, Cys-198, MOD:00660." [IEDB_epitope:1017797, PRO:DNx]


organism-gene



PR:Q18212

spliceosome RNA helicase DDX39B homolog (worm)

DDX39B (worm)


"A spliceosome RNA helicase BAT1 that is encoded in the genome of worm." [OMA:Q18212, PRO:DNx]


organism-gene



PR:Q27268

ATP-dependent RNA helicase WM6 (fruit fly)

fly-DDX39B


"A spliceosome RNA helicase BAT1 that is encoded in the genome of fruit fly." [OMA:Q27268, PRO:DNx]


organism-gene



PR:Q55CR6

uncharacterized protein, uap56 translation product (Dictyostelium discoideum)

Dicty-DDX39B


"A spliceosome RNA helicase BAT1 that is encoded in the genome of Dictyostelium discoideum." [OMA:Q55CR6, PRO:DNx]


organism-gene



PR:Q63413

spliceosome RNA helicase Ddx39b (rat)

rDDX39B


"A spliceosome RNA helicase BAT1 that is encoded in the genome of rat." [OMA:Q63413, PRO:DNx]


organism-sequence



PR:Q63413-1

spliceosome RNA helicase Ddx39b isoform 1 (rat)

rDDX39B/iso:1


"A spliceosome RNA helicase BAT1 isoform 1 that is encoded in the genome of rat." [PRO:DNx]


organism-gene



PR:Q9Z1N5

spliceosome RNA helicase Ddx39b (mouse)

mDDX39B


"A spliceosome RNA helicase BAT1 that is encoded in the genome of mouse." [OMA:Q9Z1N5, PRO:DNx]


organism-sequence



PR:Q9Z1N5-1

spliceosome RNA helicase Ddx39b isoform 1 (mouse)

mDDX39B/iso:1


"A spliceosome RNA helicase BAT1 isoform 1 that is encoded in the genome of mouse." [PRO:DNx]


sequence



PR:000040478

spliceosome RNA helicase BAT1 isoform 1

DDX39B/iso:1


"A spliceosome RNA helicase BAT1 that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q13838-1 or a 1:1 ortholog thereof." [PRO:DNx]


organism-sequence



PR:Q13838-1

spliceosome RNA helicase DDX39B isoform 1 (human)

hDDX39B/iso:1


"A spliceosome RNA helicase BAT1 isoform 1 that is encoded in the genome of human." [PRO:DNx]


organism-sequence



PR:Q63413-1

spliceosome RNA helicase Ddx39b isoform 1 (rat)

rDDX39B/iso:1


"A spliceosome RNA helicase BAT1 isoform 1 that is encoded in the genome of rat." [PRO:DNx]


organism-sequence



PR:Q9Z1N5-1

spliceosome RNA helicase Ddx39b isoform 1 (mouse)

mDDX39B/iso:1


"A spliceosome RNA helicase BAT1 isoform 1 that is encoded in the genome of mouse." [PRO:DNx]


modification



PR:000019117

spliceosome RNA helicase BAT1, initiator methionine removed form

BAT1/InitMet-


"A spliceosome RNA helicase BAT1 that has had the initiator methionine removed." [PRO:DNx]


organism-modification



PR:000047157

spliceosome RNA helicase DDX39B, initiator methionine removed form (human)

hDDX39B/InitMet-


"A spliceosome RNA helicase DDX39B (human) that has had the initiator methionine removed. UniProtKB:Q13838, 2-428." [PRO:DNx, Reactome:R-HSA-8849139]