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Protein Ontology report - transcription factor RFX4
PR:000013926 - http://purl.obolibrary.org/obo/PR_000013926
 
  Protein Forms  Annotations      
Ontology Information Show OBO stanza
  PRO ID
PR:000013926   
  PRO nametranscription factor RFX4 
  Synonyms
PRO-Short-label: EXACT:RFX4
Other: EXACT:regulatory factor X 4 | testis development protein NYD-SP10
  Definition"A protein that is a translation product of the human RFX4 gene or a 1:1 ortholog thereof." [PRO:DNx] 
  PRO Categorygene 
  ParentPR:000000001 protein
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene1                                                  Organism-Gene 3                                        
         Sequence2                                                  Organism-Sequence 8                                        
         Modification0                                                  Organism-Modification 0                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Protein Forms Switch to Compact View   

Category  
PRO ID
Name
Short Name
Definition
Ann. Has Annotation?

Comp. In Complex?
gene


PR:000013926
transcription factor RFX4
RFX4
"A protein that is a translation product of the human RFX4 gene or a 1:1 ortholog thereof." [PRO:DNx]

organism-gene


PR:Q33E94
transcription factor RFX4 (human)
hRFX4
"A transcription factor RFX4 that is encoded in the genome of human." [PRO:DNx, UniProtKB:Q33E94]

organism-sequence


PR:Q33E94-1
transcription factor RFX4 isoform 1 (human)
hRFX4/iso:1
"A transcription factor RFX4 isoform 1 that is encoded in the genome of human." [PRO:DNx]

organism-sequence


PR:Q33E94-2
transcription factor RFX4 isoform h2 (human)
hRFX4/iso:h2
"A transcription factor RFX4 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q33E94-2." [PRO:DNx, UniProtKB:Q33E94]

organism-sequence


PR:Q33E94-3
transcription factor RFX4 isoform 3 (human)
hRFX4/iso:3
"A transcription factor RFX4 isoform 3 that is encoded in the genome of human." [PRO:DNx]

organism-sequence


PR:Q33E94-4
transcription factor RFX4 isoform h4 (human)
hRFX4/iso:h4
"A transcription factor RFX4 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q33E94-4." [PRO:DNx, UniProtKB:Q33E94]

organism-gene


PR:Q7TNK1
transcription factor RFX4 (mouse)
mRFX4
"A transcription factor RFX4 that is encoded in the genome of mouse." [OMA:Q7TNK1, PRO:DNx]

organism-sequence


PR:Q7TNK1-1
transcription factor RFX4 isoform 1 (mouse)
mRFX4/iso:1
"A transcription factor RFX4 isoform 1 that is encoded in the genome of mouse." [PRO:DNx]
Yes
organism-sequence


PR:Q7TNK1-2
transcription factor RFX4 isoform 2 (mouse)
mRFX4/iso:2
"A transcription factor RFX4 isoform 3 that is encoded in the genome of mouse." [PRO:DNx]

organism-sequence


PR:Q7TNK1-3
transcription factor RFX4 isoform m3 (mouse)
mRFX4/iso:m3
"A transcription factor RFX4 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q7TNK1-3." [PRO:DNx, UniProtKB:Q7TNK1]

organism-sequence


PR:Q7TNK1-4
transcription factor RFX4 isoform m4 (mouse)
mRFX4/iso:m4
"A transcription factor RFX4 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q7TNK1-4." [PRO:DNx, UniProtKB:Q7TNK1]

sequence


PR:000040781
transcription factor RFX4 isoform 1
RFX4/iso:1
"A transcription factor RFX4 that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q33E94-1 or a 1:1 ortholog thereof." [PRO:DNx]

organism-sequence


PR:Q33E94-1
transcription factor RFX4 isoform 1 (human)
hRFX4/iso:1
"A transcription factor RFX4 isoform 1 that is encoded in the genome of human." [PRO:DNx]

organism-sequence


PR:Q7TNK1-1
transcription factor RFX4 isoform 1 (mouse)
mRFX4/iso:1
"A transcription factor RFX4 isoform 1 that is encoded in the genome of mouse." [PRO:DNx]
Yes
sequence


PR:000040782
transcription factor RFX4 isoform 3
RFX4/iso:3
"A transcription factor RFX4 that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q33E94-3 or a 1:1 ortholog thereof." [PRO:DNx]

organism-sequence


PR:Q33E94-3
transcription factor RFX4 isoform 3 (human)
hRFX4/iso:3
"A transcription factor RFX4 isoform 3 that is encoded in the genome of human." [PRO:DNx]

organism-sequence


PR:Q7TNK1-2
transcription factor RFX4 isoform 2 (mouse)
mRFX4/iso:2
"A transcription factor RFX4 isoform 3 that is encoded in the genome of mouse." [PRO:DNx]

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Functional Annotation (PRO-centric view) Switch to GO Centric View   
PRO Term GO Annotation Evidence
PR:Q7TNK1-1 mRFX4/iso:1 acts_upstream_of_or_withinGO:0021516 dorsal spinal cord development MGI_ref:2669568; PMID:12925582
GO:0021696 cerebellar cortex morphogenesis MGI_ref:2669568; PMID:12925582
GO:0030900 forebrain development MGI_ref:2669568; PMID:12925582
GO:0030901 midbrain development MGI_ref:2669568; PMID:12925582
GO:0045944 positive regulation of transcription by RNA polymerase II MGI_ref:3701709; PMID:16893423
enablesGO:0003682 chromatin binding MGI_ref:3701709; PMID:16893423
located_inGO:0005634 nucleus MGI_ref:3701709; PMID:16893423