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Protein Ontology report - syndecan-4
PR:000014553 - http://purl.obolibrary.org/obo/PR_000014553
 
  Protein Forms      
Ontology Information Show OBO stanza
  PRO ID
PR:000014553   
  PRO namesyndecan-4 
  Synonyms
PRO-Short-label: EXACT:SDC4
Other: EXACT:amphiglycan | ryudocan core protein | SYND4
  Definition"A protein that is a translation product of the human SDC4 gene or a 1:1 ortholog thereof." [PRO:DNx] 
  PRO Categorygene 
  ParentPR:000000001 protein
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene1                                                  Organism-Gene 4                                        
         Sequence0                                                  Organism-Sequence 2                                        
         Modification0                                                  Organism-Modification 5                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Protein Forms Switch to Compact View   

Category  

PRO ID

Name

Short Name

Definition

Ann. Has Annotation?

Comp. In Complex?
gene



PR:000014553

syndecan-4

SDC4


"A protein that is a translation product of the human SDC4 gene or a 1:1 ortholog thereof." [PRO:DNx]


organism-gene



PR:O35988

syndecan-4 (mouse)

mSDC4


"A syndecan-4 that is encoded in the genome of mouse." [OMA:O35988, PRO:DNx]


organism-gene



PR:P31431

syndecan-4 (human)

hSDC4


"A syndecan-4 that is encoded in the genome of human." [PRO:DNx, UniProtKB:P31431]


organism-sequence



PR:P31431-1

syndecan-4 isoform h1 (human)

hSDC4/iso:h1


"A syndecan-4 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P31431-1." [PRO:DNx, UniProtKB:P31431]


organism-sequence



PR:P31431-2

syndecan-4 isoform h2 (human)

hSDC4/iso:h2


"A syndecan-4 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P31431-2." [PRO:DNx, UniProtKB:P31431]


organism-modification



PR:000049175

syndecan-4, signal peptide removed form (human)

hSDC4/SigPep-


"A syndecan-4 (human) that has had the signal peptide removed. UniProtKB:P31431, 19-198." [PRO:DNx, Reactome:R-HSA-2054111]


organism-modification



PR:000064660

syndecan-4, signal peptide removed O-glycosylserine form (human)

hSDC4/SigPep-/OGlycoSer+


"A syndecan-4 (human) that has had the signal peptide removed and that includes at least one O-glycosylated serine. Example: UniProtKB:P31431-1, 19-198, MOD:00002." [PRO:DNx, Reactome:R-HSA-2064067, Reactome:R-HSA-2064100, Reactome:R-HSA-2064249, Reactome:R-HSA-2076330, Reactome:R-HSA-2076374, Reactome:R-HSA-2076394, Reactome:R-HSA-2076407, Reactome:R-HSA-2076411, Reactome:R-HSA-2076418, Reactome:R-HSA-2076434, Reactome:R-HSA-2076446, Reactome:R-HSA-2076460, Reactome:R-HSA-2076510, Reactome:R-HSA-2076613, Reactome:R-HSA-2076633, Reactome:R-HSA-2076635, Reactome:R-HSA-2076653, Reactome:R-HSA-2076670, Reactome:R-HSA-2076674, Reactome:R-HSA-2076694, Reactome:R-HSA-2090058]


organism-modification



PR:000061298

syndecan-4, signal peptide removed xylosylserine form (human)

hSDC4/SigPep-/XylSer+


"A syndecan-4 (human) that has had the signal peptide removed and that includes at least one xylosylserine. Example: UniProtKB:P31431-1, 19-198, MOD:00814." [PRO:DNx, Reactome:R-HSA-2064195]


organism-modification



PR:000056370

syndecan-4 O-glycosylated 1 (human)

hSDC4/OGlyco:1


"A syndecan-4 (human) that has been O-glycosylated at the residue equivalent to Ser-97 of the amino acid sequence represented by UniProtKB:P31431-1, in which the glycan composition is represented by GlyTouCan:G43417UB. Example: UniProtKB:P31431-1, Ser-97, MOD:00002~GNO:G43417UB." [GlyGen:P31431-1, PMID:30459171, PRO:DNx]


organism-modification



PR:000056371

syndecan-4 O-glycosylated 2 (human)

hSDC4/OGlyco:2


"A syndecan-4 (human) that has been O-glycosylated at the residue equivalent to Thr-24 of the amino acid sequence represented by UniProtKB:P31431-1, in which the glycan composition is represented by GlyTouCan:G43417UB. Example: UniProtKB:P31431-1, Thr-24, MOD:00005~GNO:G43417UB." [GlyGen:P31431-1, PMID:30459171, PRO:DNx]


organism-modification



PR:000061298

syndecan-4, signal peptide removed xylosylserine form (human)

hSDC4/SigPep-/XylSer+


"A syndecan-4 (human) that has had the signal peptide removed and that includes at least one xylosylserine. Example: UniProtKB:P31431-1, 19-198, MOD:00814." [PRO:DNx, Reactome:R-HSA-2064195]


organism-modification



PR:000064660

syndecan-4, signal peptide removed O-glycosylserine form (human)

hSDC4/SigPep-/OGlycoSer+


"A syndecan-4 (human) that has had the signal peptide removed and that includes at least one O-glycosylated serine. Example: UniProtKB:P31431-1, 19-198, MOD:00002." [PRO:DNx, Reactome:R-HSA-2064067, Reactome:R-HSA-2064100, Reactome:R-HSA-2064249, Reactome:R-HSA-2076330, Reactome:R-HSA-2076374, Reactome:R-HSA-2076394, Reactome:R-HSA-2076407, Reactome:R-HSA-2076411, Reactome:R-HSA-2076418, Reactome:R-HSA-2076434, Reactome:R-HSA-2076446, Reactome:R-HSA-2076460, Reactome:R-HSA-2076510, Reactome:R-HSA-2076613, Reactome:R-HSA-2076633, Reactome:R-HSA-2076635, Reactome:R-HSA-2076653, Reactome:R-HSA-2076670, Reactome:R-HSA-2076674, Reactome:R-HSA-2076694, Reactome:R-HSA-2090058]


organism-modification



PR:000061298

syndecan-4, signal peptide removed xylosylserine form (human)

hSDC4/SigPep-/XylSer+


"A syndecan-4 (human) that has had the signal peptide removed and that includes at least one xylosylserine. Example: UniProtKB:P31431-1, 19-198, MOD:00814." [PRO:DNx, Reactome:R-HSA-2064195]


organism-gene



PR:P34901

syndecan-4 (rat)

rSDC4


"A syndecan-4 that is encoded in the genome of rat." [OMA:P34901, PRO:DNx]


organism-gene



PR:P49416

syndecan-4 (chicken)

chick-SDC4


"A syndecan-4 that is encoded in the genome of chicken." [OMA:P49416, PRO:DNx]