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Protein Ontology report - nucleolar transcription factor 1
PR:000017017 - http://purl.obolibrary.org/obo/PR_000017017
 
  Protein Forms  Annotations      
Ontology Information Show OBO stanza
  PRO ID
PR:000017017   
  PRO namenucleolar transcription factor 1 
  Synonyms
PRO-Short-label: EXACT:UBTF
Gene-based: RELATED:Tcfubf | UBF | UBF1
Other: EXACT:autoantigen NOR-90 | UBF-1 | upstream-binding factor 1
  Definition"A protein that is a translation product of the human UBTF gene or a 1:1 ortholog thereof." [PRO:DNx] 
  PRO Categorygene 
  ParentPR:000000001 protein
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene1                                                  Organism-Gene 3                                        
         Sequence2                                                  Organism-Sequence 6                                        
         Modification0                                                  Organism-Modification 3                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Protein Forms Switch to Compact View   

Category  

PRO ID

Name

Short Name

Definition

Ann. Has Annotation?

Comp. In Complex?
gene



PR:000017017

nucleolar transcription factor 1

UBTF


"A protein that is a translation product of the human UBTF gene or a 1:1 ortholog thereof." [PRO:DNx]


organism-gene



PR:P17480

nucleolar transcription factor 1 (human)

hUBTF


"A nucleolar transcription factor 1 that is encoded in the genome of human." [PRO:DNx, UniProtKB:P17480]


organism-sequence



PR:P17480-1

nucleolar transcription factor 1 isoform UBF1 (human)

hUBTF/iso:UBF1


"A nucleolar transcription factor 1 isoform UBF1 that is encoded in the genome of human." [PRO:HJD]


organism-sequence



PR:P17480-2

nucleolar transcription factor 1 isoform UBF2 (human)

hUBTF/iso:UBF2


"A nucleolar transcription factor 1 isoform UBF2 that is encoded in the genome of human." [PRO:HJD]


organism-modification



PR:000049591

nucleolar transcription factor 1 phosphorylated form (human)

hUBTF/PhosRes+


"A nucleolar transcription factor 1 (human) that includes at least one phosphorylated residue. UniProtKB:P17480, MOD:00696." [PRO:DNx, Reactome:R-HSA-76039]


organism-modification



PR:000069051

nucleolar transcription factor 1 cysteinylated 1 (human)

hUBTF/Cyst:1


"A nucleolar transcription factor 1 (human) that has been cysteinylated on the residue at the position equivalent to Cys-33 of the amino acid sequence represented by UniProtKB:P17480-1. Example: UniProtKB:P17480-1, Cys-33, MOD:00765." [IEDB_epitope:1565119, PRO:DNx]


organism-modification



PR:000074856

nucleolar transcription factor 1 methylated 1 (human)

hUBTF/Me:1


"A nucleolar transcription factor 1 (human) that has been methylated on the residue at the position equivalent to Cys-328 of the amino acid sequence represented by UniProtKB:P17480-1. Example: UniProtKB:P17480-1, Cys-328, MOD:00660." [IEDB_epitope:1057980, PRO:DNx]


organism-gene



PR:P25976

nucleolar transcription factor 1 (mouse)

mUBTF


"A nucleolar transcription factor 1 that is encoded in the genome of mouse." [OMA:P25976, PRO:DNx]


organism-sequence



PR:P25976-1

nucleolar transcription factor 1 isoform UBF1 (mouse)

mUBTF/iso:UBF1


"A nucleolar transcription factor 1 isoform UBF1 that is encoded in the genome of mouse." [PRO:HJD]

Yes

organism-sequence



PR:P25976-2

nucleolar transcription factor 1 isoform UBF2 (mouse)

mUBTF/iso:UBF2


"A nucleolar transcription factor 1 isoform UBF2 that is encoded in the genome of mouse." [PRO:HJD]

Yes

organism-gene



PR:P25977

nucleolar transcription factor 1 (rat)

rUBTF


"A nucleolar transcription factor 1 that is encoded in the genome of rat." [OMA:P25977, PRO:DNx]


organism-sequence



PR:P25977-1

nucleolar transcription factor 1 isoform rUBF1 (rat)

rUBTF/iso:rUBF1


"A nucleolar transcription factor 1 (rat) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P25977-1." [PRO:DNx, UniProtKB:P25977]


organism-sequence



PR:P25977-2

nucleolar transcription factor 1 isoform rUBF2 (rat)

rUBTF/iso:rUBF2


"A nucleolar transcription factor 1 (rat) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P25977-2." [PRO:DNx, UniProtKB:P25977]


sequence



PR:000022011

nucleolar transcription factor 1 isoform UBF1

UBTF/iso:UBF1


"A nucleolar transcription factor 1 that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P25976-1 or a 1:1 ortholog thereof." [PRO:HJD]


organism-sequence



PR:P17480-1

nucleolar transcription factor 1 isoform UBF1 (human)

hUBTF/iso:UBF1


"A nucleolar transcription factor 1 isoform UBF1 that is encoded in the genome of human." [PRO:HJD]


organism-sequence



PR:P25976-1

nucleolar transcription factor 1 isoform UBF1 (mouse)

mUBTF/iso:UBF1


"A nucleolar transcription factor 1 isoform UBF1 that is encoded in the genome of mouse." [PRO:HJD]

Yes

sequence



PR:000022012

nucleolar transcription factor 1 isoform UBF2

UBTF/iso:UBF2


"A nucleolar transcription factor 1 that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P25976-2 or a 1:1 ortholog thereof." [PRO:HJD]

Yes

organism-sequence



PR:P17480-2

nucleolar transcription factor 1 isoform UBF2 (human)

hUBTF/iso:UBF2


"A nucleolar transcription factor 1 isoform UBF2 that is encoded in the genome of human." [PRO:HJD]


organism-sequence



PR:P25976-2

nucleolar transcription factor 1 isoform UBF2 (mouse)

mUBTF/iso:UBF2


"A nucleolar transcription factor 1 isoform UBF2 that is encoded in the genome of mouse." [PRO:HJD]

Yes

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Functional Annotation (PRO-centric view) Switch to GO Centric View   
PRO Term GO Annotation Evidence
PR:000022012 UBTF/iso:UBF2 acts_upstream_of_or_withinGO:0000183 rDNA heterochromatin formation MGI_ref:3836497; PMID:19103806
located_inGO:0005730 nucleolus MGI_ref:3836497; PMID:19103806
PR:P25976-1 mUBTF/iso:UBF1 acts_upstream_of_or_withinGO:0000183 rDNA heterochromatin formation MGI_ref:3836497; PMID:19103806
enablesGO:0005515 protein binding with PR:Q8QZY1 66 kDa tyrosine-rich heat shock protein (mouse) PMID:11592397
located_inGO:0005730 nucleolus PMID:11555636; PMID:12878164; PMID:14729462; PMID:15989966; PMID:19103806
PR:P25976-2 mUBTF/iso:UBF2 acts_upstream_of_or_withinGO:0000183 rDNA heterochromatin formation MGI_ref:3836497; PMID:19103806
located_inGO:0005730 nucleolus MGI_ref:3836497; PMID:19103806