back to PRO homepage
  Home |   Linked Open Data |   Browse |  
Search

|   Statistics |   Download
 RACE-PRO
 PRO tracker
 Community
 PRO Consortium
 Publications
 Documentation

Protein Ontology report - syndetin
PR:000032453 - http://purl.obolibrary.org/obo/PR_000032453
 
  Protein Forms      
Ontology Information Show OBO stanza
  PRO ID
PR:000032453   
  PRO namesyndetin 
  Synonyms
PRO-Short-label: EXACT:VPS50
Gene-based: RELATED:CCDC132 | KIAA1861
Other: EXACT:coiled-coil domain-containing protein 132 | EARP/GARPII complex subunit VPS50
  Definition"A protein that is a translation product of the human VPS50 gene or a 1:1 ortholog thereof." [PRO:DNx] 
  PRO Categorygene 
  ParentPR:000000001 protein
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene1                                                  Organism-Gene 4                                        
         Sequence1                                                  Organism-Sequence 6                                        
         Modification0                                                  Organism-Modification 4                                        
  Term Hierarchy
  Visualization
DAG: OLS:
Back to top
Protein Forms Switch to Compact View   

Category  

PRO ID

Name

Short Name

Definition

Ann. Has Annotation?

Comp. In Complex?
gene



PR:000032453

syndetin

VPS50


"A protein that is a translation product of the human VPS50 gene or a 1:1 ortholog thereof." [PRO:DNx]


organism-gene



PR:F1LSG8

syndetin (rat)

rVPS50


"A syndetin that is encoded in the genome of rat." [OMA:F1LSG8, PRO:DNx]


organism-gene



PR:Q5ZKV9

syndetin (chicken)

chick-VPS50


"A syndetin that is encoded in the genome of chicken." [PRO:DNx]


organism-gene



PR:Q8CI71

syndetin (mouse)

mVPS50


"A syndetin that is encoded in the genome of mouse." [OMA:Q8CI71, PRO:DNx]


organism-sequence



PR:Q8CI71-1

syndetin isoform 1 (mouse)

mVPS50/iso:1


"A syndetin isoform 1 that is encoded in the genome of mouse." [PRO:DNx]


organism-sequence



PR:Q8CI71-2

syndetin isoform m2 (mouse)

mVPS50/iso:m2


"A syndetin (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8CI71-2." [PRO:DNx, UniProtKB:Q8CI71]


organism-sequence



PR:Q8CI71-3

syndetin isoform m3 (mouse)

mVPS50/iso:m3


"A syndetin (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8CI71-3." [PRO:DNx, UniProtKB:Q8CI71]


organism-modification



PR:000078868

syndetin cysteinylated 1 (mouse)

mVPS50/Cyst:1


"A syndetin (mouse) that has been cysteinylated on the residue at the position equivalent to Cys-313 of the amino acid sequence represented by UniProtKB:Q8CI71-1. Example: UniProtKB:Q8CI71-1, Cys-313, MOD:00765." [IEDB_epitope:2105150, PRO:DNx]


organism-gene



PR:Q96JG6

syndetin (human)

hVPS50


"A syndetin that is encoded in the genome of human." [PRO:DNx, UniProtKB:Q96JG6]


organism-sequence



PR:Q96JG6-1

syndetin isoform 1 (human)

hVPS50/iso:1


"A syndetin isoform 1 that is encoded in the genome of human." [PRO:DNx]


organism-sequence



PR:Q96JG6-2

syndetin isoform h2 (human)

hVPS50/iso:h2


"A syndetin (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q96JG6-2." [PRO:DNx, UniProtKB:Q96JG6]


organism-sequence



PR:Q96JG6-3

syndetin isoform h3 (human)

hVPS50/iso:h3


"A syndetin (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q96JG6-3." [PRO:DNx, UniProtKB:Q96JG6]


organism-modification



PR:000072172

syndetin deaminated 1 (human)

hVPS50/Deam:1


"A syndetin (human) that has been deaminated on the residue at the position equivalent to Asn-138 of the amino acid sequence represented by UniProtKB:Q96JG6-1. Example: UniProtKB:Q96JG6-1, Asn-138, MOD:00684." [IEDB_epitope:1991884, PRO:DNx]


organism-modification



PR:000073042

syndetin methylated 1 (human)

hVPS50/Me:1


"A syndetin (human) that has been methylated on the residue at the position equivalent to Cys-851 of the amino acid sequence represented by UniProtKB:Q96JG6-1. Example: UniProtKB:Q96JG6-1, Cys-851, MOD:00660." [IEDB_epitope:1021292, PRO:DNx]


organism-modification



PR:000084025

syndetin deaminated 2 (human)

hVPS50/Deam:2


"A syndetin (human) that has been deaminated on the residue at the position equivalent to Asn-613 of the amino acid sequence represented by UniProtKB:Q96JG6-1. Example: UniProtKB:Q96JG6-1, Asn-613, MOD:00684." [IEDB_epitope:1333032, PRO:DNx]


sequence



PR:000042574

syndetin isoform 1

VPS50/iso:1


"A syndetin that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q96JG6-1 or a 1:1 ortholog thereof." [PRO:DNx]


organism-sequence



PR:Q8CI71-1

syndetin isoform 1 (mouse)

mVPS50/iso:1


"A syndetin isoform 1 that is encoded in the genome of mouse." [PRO:DNx]


organism-sequence



PR:Q96JG6-1

syndetin isoform 1 (human)

hVPS50/iso:1


"A syndetin isoform 1 that is encoded in the genome of human." [PRO:DNx]