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RACE-PRO
PRO tracker
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Documentation
Protein Ontology report - integrin beta-1 isoform beta-1D
PR:000037161 -
http://purl.obolibrary.org/obo/PR_000037161
Protein Forms
Annotations
Ontology Information
Show OBO stanza
PRO ID
PR:000037161
PRO name
integrin beta-1 isoform beta-1D
Synonyms
PRO-Short-label
:
EXACT:
ITGB1/iso:beta-1D
Other
:
EXACT:
Beta 1D integrin
Definition
"An integrin beta-1 that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by
UniProtKB:P05556-5
or a 1:1 ortholog thereof." [PRO:CNA,
UniProtKB:P05556
]
PRO Category
sequence
Parent
PR:000002040
integrin beta-1
Terms by PRO Category
Organism-Independent
Organism-Specific
Category
Number of Terms
Category
Number of Terms
Sequence
1
Organism-Sequence
2
Modification
0
Organism-Modification
0
Term Hierarchy
Visualization
DAG:
OLS:
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Protein Forms
Switch to
Compact View
Category
PRO ID
Name
Short Name
Definition
Ann.
Has Annotation?
Comp.
In Complex?
sequence
PR:000037161
integrin beta-1 isoform beta-1D
ITGB1/iso:beta-1D
"An integrin beta-1 that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P05556-5 or a 1:1 ortholog thereof." [PRO:CNA, UniProtKB:P05556]
organism-sequence
PR:P05556-5
integrin beta-1 isoform beta-1D (human)
hITGB1/iso:beta-1D
"An integrin beta-1 isoform beta-1D that is encoded in the genome of human." [PRO:CNA, UniProtKB:P05556]
organism-sequence
PR:P09055-2
integrin beta-1 isoform beta-1D (mouse)
mITGB1/iso:beta-1D
"An integrin beta-1 isoform beta-1D that is encoded in the genome of mouse. This isoform contains a unique alternatively spliced cytoplasmic domain of 50 amino acids, with the last 24 amino acids encoded by an additional exon, 11 of these are in common with the isoform beta-1A." [PMID:8567725, PMID:8870969, PMID:9553049, PRO:KRC]
Yes
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Functional Annotation (PRO-centric view)
Switch to
GO Centric View
PRO Term
GO Annotation
Evidence
PR:P09055-2
mITGB1/iso:beta-1D
This isoform contains a unique alternatively spliced cytoplasmic domain of 50 amino acids, with the last 24 amino acids encoded by an additional exon, 11 of these are in common with the isoform beta-1A
acts_upstream_of_or_within
GO:0048738
cardiac muscle tissue development
MGI_ref:1203253;
PMID:9553049
