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Protein Ontology report - rep gene translation product (SARS-CoV-2)
PR:000050263 - http://purl.obolibrary.org/obo/PR_000050263
 
  Protein Forms      
Ontology Information Show OBO stanza / GPI
  PRO ID
PR:000050263   
  PRO namerep gene translation product (SARS-CoV-2) 
  Synonyms
PRO-Short-label: EXACT:ORF1ab (SARS2)
Gene-based: RELATED:GU280_gp01 | ORF1a-1b | ORF1ab | rep
  Definition"A protein that is a translation product of the ORF1ab gene in SARS-CoV-2." [PRO:DAN] 
  CommentNote: The rep gene produces two translation products, one with (ORF1ab) and one without (ORF1a) -1 ribosomal frameshifting. Both products are further processed by proteolytic cleavage to yield 10 identical chains, while 1 additional chain is unique to ORF1a and 5 additional chains are unique to ORF1ab. 
  PRO Categoryorganism-gene 
  ParentPR:000050262 severe acute respiratory syndrome coronavirus 2 protein
  Gene TemplateNCBIGene:43740578 ORF1ab (Severe acute respiratory syndrome coronavirus 2)
  TaxonNCBITaxon:2697049 Severe acute respiratory syndrome coronavirus 2
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene0                                                  Organism-Gene 1                                        
         Sequence0                                                  Organism-Sequence 2                                        
         Modification0                                                  Organism-Modification 20                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Protein Forms  Switch to Extended View   

Category  
PRO Form Name
Short Name
Ann. Has Annotation?

Comp. In Complex?
organism-gene


PR:000050263 rep gene translation product (SARS-CoV-2)
ORF1ab (SARS2)

organism-sequence


PR:P0DTC1-1 replicase polyprotein 1a (SARS-CoV-2)
rep/iso:ORF1a (SARS2)

organism-modification


PR:000050282 ORF1a proteolytic cleavage product (SARS-CoV-2)
ORF1a/ClvPrd (SARS2)

organism-modification


PR:000050280 non-structural protein 11 (SARS-CoV-2)
rep/Clv:nsp11 (SARS2)

organism-sequence


PR:P0DTD1-1 replicase polyprotein 1ab (SARS-CoV-2)
rep/iso:ORF1ab (SARS2)

organism-modification


PR:000050283 ORF1ab proteolytic cleavage product (SARS-CoV-2)
ORF1ab/ClvPrd (SARS2)

organism-modification


PR:000050284 RNA-directed RNA polymerase nsp12 (SARS-CoV-2)
ORF1ab/Clv:nsp12 (SARS2)

organism-modification


PR:000050285 helicase nsp13 (SARS-CoV-2)
ORF1ab/Clv:nsp13 (SARS2)

organism-modification


PR:000050286 proofreading exoribonuclease nsp14 (SARS-CoV-2)
ORF1ab/Clv:nsp14 (SARS2)

organism-modification


PR:000050287 uridylate-specific endoribonuclease nsp15 (SARS-CoV-2)
ORF1ab/Clv:nsp15 (SARS2)

organism-modification


PR:000050288 2'-O-methyltransferase nsp16 (SARS-CoV-2)
ORF1ab/Clv:nsp16 (SARS2)

organism-modification


PR:000050281 rep gene proteolytic cleavage product (SARS-CoV-2)
rep/ClvPrd (SARS2)

organism-modification


PR:000050270 host translation inhibitor nsp1 (SARS-CoV-2)
rep/Clv:nsp1 (SARS2)

organism-modification


PR:000050271 non-structural protein 2 (SARS-CoV-2)
rep/Clv:nsp2 (SARS2)

organism-modification


PR:000050272 papain-like proteinase nsp3 (SARS-CoV-2)
rep/Clv:nsp3 (SARS2)

organism-modification


PR:000050273 non-structural protein 4 (SARS-CoV-2)
rep/Clv:nsp4 (SARS2)

organism-modification


PR:000050274 3C-like proteinase nsp5 (SARS-CoV-2)
rep/Clv:nsp5 (SARS2)

organism-modification


PR:000050275 non-structural protein 6 (SARS-CoV-2)
rep/Clv:nsp6 (SARS2)

organism-modification


PR:000050276 non-structural protein 7 (SARS-CoV-2)
rep/Clv:nsp7 (SARS2)

organism-modification


PR:000050277 non-structural protein 8 (SARS-CoV-2)
rep/Clv:nsp8 (SARS2)

organism-modification


PR:000050278 non-structural protein 9 (SARS-CoV-2)
rep/Clv:nsp9 (SARS2)

organism-modification


PR:000050279 non-structural protein 10 (SARS-CoV-2)
rep/Clv:nsp10 (SARS2)

organism-modification


PR:000050282 ORF1a proteolytic cleavage product (SARS-CoV-2)
ORF1a/ClvPrd (SARS2)

organism-modification


PR:000050280 non-structural protein 11 (SARS-CoV-2)
rep/Clv:nsp11 (SARS2)

organism-modification


PR:000050283 ORF1ab proteolytic cleavage product (SARS-CoV-2)
ORF1ab/ClvPrd (SARS2)

organism-modification


PR:000050284 RNA-directed RNA polymerase nsp12 (SARS-CoV-2)
ORF1ab/Clv:nsp12 (SARS2)

organism-modification


PR:000050285 helicase nsp13 (SARS-CoV-2)
ORF1ab/Clv:nsp13 (SARS2)

organism-modification


PR:000050286 proofreading exoribonuclease nsp14 (SARS-CoV-2)
ORF1ab/Clv:nsp14 (SARS2)

organism-modification


PR:000050287 uridylate-specific endoribonuclease nsp15 (SARS-CoV-2)
ORF1ab/Clv:nsp15 (SARS2)

organism-modification


PR:000050288 2'-O-methyltransferase nsp16 (SARS-CoV-2)
ORF1ab/Clv:nsp16 (SARS2)

organism-modification


PR:000050289 NSP2-3 intermediate (SARS-CoV-2)
rep/Clv:nsp2-3 (SARS2)