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Protein Ontology report - lysine-specific histone demethylase 1B (mouse)
PR:Q8CIG3 - http://purl.obolibrary.org/obo/PR_Q8CIG3
 
  Protein Forms  Annotations      
Ontology Information Show OBO stanza / PAF / GPI
  PRO ID
PR:Q8CIG3   
  PRO namelysine-specific histone demethylase 1B (mouse) 
  Synonyms
PRO-Short-label: EXACT:mKDM1B
Gene-based: RELATED:Aof1 | Kdm1b | Lsd2
Other: EXACT:flavin-containing amine oxidase domain-containing protein 1 (mouse) | lysine-specific histone demethylase 2 (mouse)
  Definition"A lysine-specific histone demethylase 2 that is encoded in the genome of mouse." [OMA:Q8CIG3, PRO:DNx] 
  PRO Categoryorganism-gene 
  ParentPR:000003320 lysine-specific histone demethylase 2
PR:000029032 Mus musculus protein
  Gene TemplateMGI:2145261 Kdm1b (mouse)
  TaxonNCBITaxon:10090 Mus musculus
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene0                                                  Organism-Gene 1                                        
         Sequence0                                                  Organism-Sequence 3                                        
         Modification0                                                  Organism-Modification 0                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Related Cross References

  Db identifiers
UniProtKB:Q8CIG3
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Protein Forms  Switch to Extended View   

Category  

PRO Form Name

Short Name

Ann. Has Annotation?

Comp. In Complex?
organism-gene



PR:Q8CIG3 lysine-specific histone demethylase 1B (mouse)

mKDM1B

Yes

organism-sequence



PR:Q8CIG3-1 lysine-specific histone demethylase 1B isoform 1 (mouse)

mKDM1B/iso:1

Yes

organism-sequence



PR:Q8CIG3-2 lysine-specific histone demethylase 1B isoform m2 (mouse)

mKDM1B/iso:m2


organism-sequence



PR:Q8CIG3-3 lysine-specific histone demethylase 1B isoform m3 (mouse)

mKDM1B/iso:m3


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Functional Annotation (GO-centric view) Switch to PRO Centric View     

Biological Process GO Term

Protein Forms & Complexes

Evidence
GO:0071514 genomic imprintingPR:Q8CIG3 mKDM1B PMID:19727073

Molecular Function GO Term

Protein Forms & Complexes

Evidence
GO:0008270 zinc ion bindingPR:Q8CIG3-1 mKDM1B/iso:1 PMID:19407342
GO:0034647 histone H3K4me/H3K4me2/H3K4me3 demethylase activityPR:Q8CIG3-1 mKDM1B/iso:1 PMID:19727073
PR:Q8CIG3-1 mKDM1B/iso:1 PMID:19727073
PR:Q8CIG3-1 mKDM1B/iso:1 PMID:19727073
PR:Q8CIG3-1 mKDM1B/iso:1 PMID:19727073
PR:Q8CIG3-1 mKDM1B/iso:1 PMID:19727073
PR:Q8CIG3-1 mKDM1B/iso:1 PMID:19727073
GO:0050660 flavin adenine dinucleotide bindingPR:Q8CIG3-1 mKDM1B/iso:1 PMID:19407342

Cellular Location GO Term

Protein Forms & Complexes

Evidence
GO:0005634 nucleusPR:Q8CIG3-1 mKDM1B/iso:1 PMID:19727073