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Properties defined in PRO

pr:has_modification a owl:ObjectProperty ;
rdfs:label "has_modification"
oboInOwl:hasOBONamespace "protein"
oboInOwl:id "has_modification"
oboInOwl:is_transitive false
owl:deprecated true


oboInOwl:hasAlternativeId
rdf:type owl:AnnotationProperty
rdfs:label "has_alternative_id"


obo:BFO_0000050 a owl:TransitiveProperty , owl:ObjectProperty ;
rdfs:label "part_of"
oboInOwl:hasDbXref "BFO:0000050"
oboInOwl:hasOBONamespace "protein"
oboInOwl:id "part_of"
oboInOwl:shorthand "part_of"


obo:BFO_0000051 a owl:TransitiveProperty , owl:ObjectProperty ;
rdfs:label "has_part"
oboInOwl:hasDbXref "BFO:0000051"
oboInOwl:hasOBONamespace "protein"
oboInOwl:id "has_part"
oboInOwl:shorthand "has_part"


pr:PRO-common-name a owl:AnnotationProperty ;
rdfs:label "Label appended to organism-specific terms in place of scientific name"
rdfs:subPropertyOf oboInOwl:SynonymTypeProperty
oboInOwl:hasScope oboInOwl:hasExactSynonym


oboInOwl:id a owl:AnnotationProperty .


oboInOwl:hasRelatedSynonym
rdf:type owl:AnnotationProperty
rdfs:label "has_related_synonym"


pr:PRO-proteoform-ftid
rdf:type owl:AnnotationProperty
rdfs:label "Synonyms for proteoforms based on use of UniProtKb feature identifier (FTId) and positions and types of modifications or variations"
rdfs:subPropertyOf oboInOwl:SynonymTypeProperty
oboInOwl:hasScope oboInOwl:hasExactSynonym


oboInOwl:hasNarrowSynonym
rdf:type owl:AnnotationProperty
rdfs:label "has_narrow_synonym"


oboInOwl:hasOBOFormatVersion
rdf:type owl:AnnotationProperty
rdfs:label "has_obo_format_version"


oboInOwl:hasSynonymType
rdf:type owl:AnnotationProperty
rdfs:label "has_synonym_type"


pr:has_gene_template a owl:ObjectProperty ;
rdfs:label "has_gene_template"
oboInOwl:hasOBONamespace "protein"
oboInOwl:id "has_gene_template"
oboInOwl:is_transitive false


oboInOwl:hasDbXref a owl:AnnotationProperty ;
rdfs:label "database_cross_reference"


oboInOwl:SynonymTypeProperty
rdf:type owl:AnnotationProperty
rdfs:label "synonym_type_property"


rdfs:comment a owl:AnnotationProperty .


oboInOwl:hasBroadSynonym
rdf:type owl:AnnotationProperty
rdfs:label "has_broad_synonym"


pr:PRO-proteoform-std
rdf:type owl:AnnotationProperty
rdfs:label "Synonyms for proteoforms based on use of UniProtKb accession, subsequence range, and positions and types of modifications or variations"
rdfs:subPropertyOf oboInOwl:SynonymTypeProperty
oboInOwl:hasScope oboInOwl:hasExactSynonym


obo:IAO_0000115 a owl:AnnotationProperty ;
rdfs:label "definition"


pr:PSI-MOD-label a owl:AnnotationProperty ;
rdfs:label "Unique short label curated by PSI-MOD"
rdfs:subPropertyOf oboInOwl:SynonymTypeProperty
oboInOwl:hasScope oboInOwl:hasExactSynonym


obo:RO_0002160 a owl:ObjectProperty ;
rdfs:comment "Down-propagates. The original name for this in the paper is 'specific_to'. Applicable to genes because some genes are lost in sub-species (strains) of a species."
rdfs:label "only_in_taxon"
obo:IAO_0000115 "U only_in_taxon T: U is a feature found in only in organisms of species of taxon T. The feature cannot be found in an organism of any species outside of (not subsumed by) that taxon. Down-propagates in U hierarchy, up-propagates in T hierarchy (species taxonomy). Implies applicable_to_taxon."
oboInOwl:hasDbXref "RO:0002160"
oboInOwl:hasExactSynonym "specific_to"
oboInOwl:hasExactSynonym specific_to_taxon"
oboInOwl:hasExactSynonym never_outside_taxon"
oboInOwl:hasOBONamespace "protein"
oboInOwl:id "only_in_taxon"
oboInOwl:is_transitive false
oboInOwl:shorthand "only_in_taxon"


obo:RO_0001000 a owl:TransitiveProperty , owl:ObjectProperty ;
rdfs:label "derives_from"
oboInOwl:hasDbXref "RO:0001000"
oboInOwl:hasOBONamespace "protein"
oboInOwl:id "derives_from"
oboInOwl:shorthand "derives_from"


oboInOwl:saved-by a owl:AnnotationProperty .


obo:RO_0002180 a owl:ObjectProperty ;
rdfs:label "has_component"
oboInOwl:hasDbXref "RO:0002180"
oboInOwl:hasOBONamespace "protein"
oboInOwl:id "has_component"
oboInOwl:is_transitive false
oboInOwl:shorthand "has_component"


obo:IAO_0100001 a owl:AnnotationProperty ;
rdfs:label "term replaced by"


owl:deprecated a owl:AnnotationProperty .


obo:RO_0001025 a owl:TransitiveProperty , owl:ObjectProperty ;
rdfs:label "located_in"
oboInOwl:hasDbXref "RO:0001025"
oboInOwl:hasOBONamespace "protein"
oboInOwl:id "located_in"
oboInOwl:shorthand "located_in"


obo:RO_0000056 a owl:ObjectProperty ;
rdfs:label "participates_in"
oboInOwl:hasDbXref "RO:0000056"
oboInOwl:hasOBONamespace "protein"
oboInOwl:id "participates_in"
oboInOwl:is_transitive false
oboInOwl:shorthand "participates_in"


pr:non-covalently_bound_to
rdf:type owl:SymmetricProperty
rdf:type owl:ObjectProperty
rdfs:domain obo:CHEBI_24431
rdfs:label "non-covalently_bound_to"
rdfs:range obo:CHEBI_24431
obo:IAO_0000115 "A relation that holds between two distinct chemical entities that are held in close proximity to each other specifically via the force of non-covalent interactions. Such entities will, at all times of the interaction, colocalize with each other."
oboInOwl:hasOBONamespace "protein"
oboInOwl:id "non-covalently_bound_to"


pr:lacks_part a owl:ObjectProperty ;
rdfs:label "lacks_part"
oboInOwl:hasOBONamespace "protein"
oboInOwl:id "lacks_part"
oboInOwl:is_transitive false


obo:RO_0000086 a owl:ObjectProperty ;
rdfs:label "has_quality"
oboInOwl:hasDbXref "RO:0000086"
oboInOwl:hasOBONamespace "protein"
oboInOwl:id "has_quality"
oboInOwl:is_transitive false
oboInOwl:shorthand "has_quality"


rdfs:label a owl:AnnotationProperty .


pr:PRO-short-label a owl:AnnotationProperty ;
rdfs:label "Unique short label for PRO terms for display purposes; based on orthology"
rdfs:subPropertyOf oboInOwl:SynonymTypeProperty
oboInOwl:hasScope oboInOwl:hasExactSynonym


pr:lacks_modification
rdf:type owl:ObjectProperty
rdfs:label "lacks_modification"
oboInOwl:hasOBONamespace "protein"
oboInOwl:id "lacks_modification"
oboInOwl:is_transitive false
owl:deprecated true


oboInOwl:date a owl:AnnotationProperty .


oboInOwl:hasOBONamespace
rdf:type owl:AnnotationProperty
rdfs:label "has_obo_namespace"


oboInOwl:hasExactSynonym
rdf:type owl:AnnotationProperty
rdfs:label "has_exact_synonym"


oboInOwl:auto-generated-by
rdf:type owl:AnnotationProperty


oboInOwl:hasScope a owl:AnnotationProperty ;
rdfs:label "has_scope"


oboInOwl:default-namespace
rdf:type owl:AnnotationProperty


oboInOwl:consider a owl:AnnotationProperty ;
rdfs:label "consider"


pr:1to1_ortholog_of a owl:TransitiveProperty , owl:ObjectProperty ;
rdfs:comment "Definition is modeled after the definition in the Homology Ontology term HOM:0000020."
rdfs:label "1to1_ortholog_of"
obo:IAO_0000115 "If a and b are genes, a 1to1_ortholog_of b iff neither a nor b was duplicated after the speciation event that created them. If a and b are proteins, then a 1to1_ortholog_of b iff a has_gene_template some gene A and b has_gene_template some gene B and A 1to1_ortholog_of B."
oboInOwl:hasOBONamespace "protein"
oboInOwl:id "1to1_ortholog_of"


oboInOwl:is_transitive
rdf:type owl:AnnotationProperty