| Sample Queries |
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| 1. |
Retrieve PRO with all modified form.
[show] |
| 2. |
Retrieve PRO with cleaved form.
[show] |
| 3. |
Retrieve all PRO terms that represent a specified protein modification form.
[show] |
| 4. |
Retrieve direct subclasses (PRO term, Label, and Category comment) of TGF-beta superfamily receptor type-1.
[show] |
| 5. |
Retrieve all the subclasses (PRO term, Label and Category comment) of TGF-beta superfamily receptor type-1.
[show] |
| 6. |
Retrieve all functional annotations for PR:000037190.
[show] |
| 7. |
Federated query with UniProt SPARQL endpoint.
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| 8. |
Retrieve proteoforms associated with disease progression.
[show] |
| 9. |
Retrieve all phospho-proteoforms and their acting kinases.
[show] |
| 10. |
Federated Query: get all PRO human genes whose uniprot counterpart has variants with loss of function implicated in disease.
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| 11. |
Federated Query: get all PRO human genes whose uniprot counterpart has variants with gain of function implicated in disease.
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| 12. |
Retrieve all PRO terms that pertain to products of a specified gene.
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| 13. |
Retrieve information pertaining to the gene encoding a protein of interest.
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| 14. |
Federated Query: for genes in ProKinO, count the number of homologs and modifications in PRO.
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| 15. |
Federated Query: for genes 'EGFR' 'PKCB' 'PKCT' in ProKinO, get their proteoforms that are part of complexes from PRO.
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| 16. |
Federated Query: for genes 'EGFR' 'PKCB' 'PKCT' in ProKinO, get their proteoforms with molecular functions from PRO.
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| 17. |
Federated Query: for gene 'EGFR' in ProKinO, get their proteoforms from PRO that have a modification at site 768.
[show] |
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